RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ERVK-5Q9HDB9 667 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 TSKSQ9UJT2 592 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 TRPC6Q9Y210 931 aa9.47□□□□□ -0.89
SNCA-206ENST00000420646 CXCL11O14625 94 aa9.46□□□□□ -0.89
SNCA-206ENST00000420646 SART1O43290 800 aaKnown RBP9.46□□□□□ -0.89
SNCA-206ENST00000420646 GRIN3BO60391 1043 aa9.46□□□□□ -0.89
SNCA-206ENST00000420646 PIK3CAP42336 1068 aa9.46□□□□□ -0.89
SNCA-206ENST00000420646 TUBB4BP68371 445 aa9.46□□□□□ -0.89
SNCA-206ENST00000420646 LAMTOR4Q0VGL1 99 aa9.46□□□□□ -0.89
SNCA-206ENST00000420646 THNSL1Q8IYQ7 743 aa9.46□□□□□ -0.89
SNCA-206ENST00000420646 DDX1Q92499 740 aaKnown RBP9.46□□□□□ -0.89
SNCA-206ENST00000420646 NIFKQ9BYG3 293 aaKnown RBP9.46□□□□□ -0.89
SNCA-206ENST00000420646 NRBP2Q9NSY0 501 aa9.46□□□□□ -0.89
SNCA-206ENST00000420646 ADAM21Q9UKJ8 722 aa9.46□□□□□ -0.89
SNCA-206ENST00000420646 COQ4Q9Y3A0 265 aa9.46□□□□□ -0.89
SNCA-206ENST00000420646 TCRBV7S2A1N4TA0A589 114 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 P4HA2O15460 535 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 DDX3YO15523 660 aaKnown RBP9.46□□□□□ -0.9
SNCA-206ENST00000420646 CLDN3O15551 220 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 C4BPAP04003 597 aaKnown RBP9.46□□□□□ -0.9
SNCA-206ENST00000420646 CCDC172P0C7W6 258 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 COMTP21964 271 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 GARTP22102 1010 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 NAMPTP43490 491 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 IRX5P78411 483 aaPredicted RBP9.46□□□□□ -0.9
SNCA-206ENST00000420646 CELF3Q5SZQ8 465 aaKnown RBP9.46□□□□□ -0.9
SNCA-206ENST00000420646 CCDC70Q6NSX1 233 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 TMEM270Q6UE05 265 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 TAF1DQ9H5J8 278 aaPredicted RBP9.46□□□□□ -0.9
SNCA-206ENST00000420646 KCNH4Q9UQ05 1017 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 NUB1Q9Y5A7 615 aa9.46□□□□□ -0.9
SNCA-206ENST00000420646 A0A0B4J269 797 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 INO80B-WBP1J3KQ70 363 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 TTI1O43156 1089 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 ADCY3O60266 1144 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 ZNF286BP0CG31 522 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 CD58P19256 250 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 GPC5P78333 572 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 PPIL2Q13356 520 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 PLCB4Q15147 1175 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 IFI16Q16666 785 aaKnown RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 SKIDA1Q1XH10 827 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 ZACNQ401N2 412 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 ZDHHC14Q8IZN3 488 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 TMC2Q8TDI7 906 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 TMEM174Q8WUU8 243 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 ZNF653Q96CK0 615 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 CYFIP2Q96F07 1278 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 NUP85Q9BW27 656 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 INO80BQ9C086 356 aaPredicted RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 MTMR12Q9C0I1 747 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 ISCUQ9H1K1 167 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 NEUROG2Q9H2A3 272 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 NMRK2Q9NPI5 230 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 RNF19AQ9NV58 838 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 SUCLA2Q9P2R7 463 aaPredicted RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 LOXHD1Q8IVV2 1947 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 DNAJC25-GNG10A0A024R161 153 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 PGRMC1O00264 195 aaKnown RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 O00370 1275 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 MAPK13O15264 365 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 MSCO60682 206 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 MAFO75444 373 aaPredicted RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 FLT3P36888 993 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 PDE6CP51160 858 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 RTP1P59025 263 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 HLTFQ14527 1009 aaKnown RBP eCLIP9.45□□□□□ -0.9
SNCA-206ENST00000420646 DNAJC21Q5F1R6 531 aaKnown RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 SLC17A8Q8NDX2 589 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 SCFD2Q8WU76 684 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 RNPC3Q96LT9 517 aaKnown RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.45□□□□□ -0.9
SNCA-206ENST00000420646 TRIM51Q9BSJ1 452 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 C1orf112Q9NSG2 853 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 TMEM59LQ9UK28 342 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 A0A0A6YYK5 440 aaPredicted RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 KRT14P02533 472 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 ADCYAP1R1P41586 468 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 SNRPFP62306 86 aaKnown RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 ITIH3Q06033 890 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 GABPB1Q06547 395 aaPredicted RBP9.45□□□□□ -0.9
SNCA-206ENST00000420646 ORC1Q13415 861 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 EEF1DP3Q658K8 133 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 CCDC62Q6P9F0 684 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 SCARA5Q6ZMJ2 495 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 C15orf39Q6ZRI6 1047 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 ARMCX2Q7L311 632 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 LMBR1Q8WVP7 490 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 DPH5Q9H2P9 285 aa9.45□□□□□ -0.9
SNCA-206ENST00000420646 DICER1Q9UPY3 1922 aaKnown RBP9.44□□□□□ -0.9
SNCA-206ENST00000420646 NCANO14594 1321 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 CNTNAP2Q9UHC6 1331 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 PDHXO00330 501 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 RNF40O75150 1001 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 RTN2O75298 545 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 WEE2P0C1S8 567 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 TGFB3P10600 412 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 ADORA2AP29274 412 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms