RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 KANSL2Q9H9L4 492 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 ROPN1Q9HAT0 212 aaPredicted RBP6.53□□□□□ -1.36
CHD2-202ENST00000420239 BARHL2Q9NY43 387 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 CTTNBP2NLQ9P2B4 639 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 TMCO1Q9UM00 188 aa6.53□□□□□ -1.36
CHD2-202ENST00000420239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHD2-202ENST00000420239 MAST2Q6P0Q8 1798 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 MAGEA13PA6NCF6 341 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 ERVV-1B6SEH8 477 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 EYA4O95677 639 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 ALAS1P13196 640 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 TAC1P20366 129 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 IGFBP4P22692 258 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 MPSTP25325 297 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 BPIFB4P59827 614 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 LSAMPQ13449 338 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 TNIP1Q15025 636 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 LRRC41Q15345 812 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 SLC35G1Q2M3R5 365 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 KHDC1Q4VXA5 237 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 EAPPQ56P03 285 aaPredicted RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 SNX30Q5VWJ9 437 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 CYB5RLQ6IPT4 315 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 TMC7Q7Z402 723 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 ZCRB1Q8TBF4 217 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 LRRC8CQ8TDW0 803 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 SCG3Q8WXD2 468 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 LARP4BQ92615 738 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 ARHGEF2Q92974 986 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 KCTD12Q96CX2 325 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 MTMR9Q96QG7 549 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 MIPEPQ99797 713 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 TLE6Q9H808 572 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 KLHL14Q9P2G3 628 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 LRP2BPQ9P2M1 347 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 SEC63Q9UGP8 760 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 NAGPAQ9UK23 515 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 AJAP1Q9UKB5 411 aaPredicted RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 CDV3Q9UKY7 258 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 RPL26L1Q9UNX3 145 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 PCDHA3Q9Y5H8 950 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 SLC4A7Q9Y6M7 1214 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 SLIT2O94813 1529 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 NCANO14594 1321 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 PITPNM2Q9BZ72 1349 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 IGSF9BQ9UPX0 1349 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 C10orf71Q711Q0 1435 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 CYP2D7A0A087X1C5 515 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 ERVH48-1M5A8F1 160 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 PLSCR1O15162 318 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 CBX6O95503 412 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 UBTFL6P0CB48 400 aaPredicted RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 ACTN1P12814 892 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 ETS2P15036 469 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 RTP1P59025 263 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 PPATQ06203 517 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 MAPK7Q13164 816 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 RCN1Q15293 331 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 TTC27Q6P3X3 843 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 ZNF449Q6P9G9 518 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 SEPT14Q6ZU15 432 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 VSIG1Q86XK7 387 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 TRIM42Q8IWZ5 723 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 ZNF34Q8IZ26 560 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 MYOCDQ8IZQ8 938 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 TNS4Q8IZW8 715 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 SH3RF3Q8TEJ3 882 aaPredicted RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 RAD54LQ92698 747 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 DNAJC19Q96DA6 116 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 C18orf8Q96DM3 657 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 HAPLN3Q96S86 360 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 NAP1L3Q99457 506 aaPredicted RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 DDX50Q9BQ39 737 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 LBHD1Q9BQE6 289 aaPredicted RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 LZTS2Q9BRK4 669 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 SPATA16Q9BXB7 569 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 SAP130Q9H0E3 1048 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 METTL5Q9NRN9 209 aaKnown RBP6.52□□□□□ -1.37
CHD2-202ENST00000420239 PDP2Q9P2J9 529 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 HSFX1Q9UBD0 423 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 MAD2L2Q9UI95 211 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 LNPEPQ9UIQ6 1025 aa6.52□□□□□ -1.37
CHD2-202ENST00000420239 DCCP43146 1447 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 ESYT2A0FGR8 921 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 SLC26A4O43511 780 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 ATP5HO75947 161 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 H2AFZP0C0S5 128 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 FAM200BP0CF97 657 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 HSPA6P17066 643 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 NPR3P17342 541 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 ALDH1B1P30837 517 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 CCNFP41002 786 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 NEK3P51956 506 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 YARSP54577 528 aaKnown RBP6.51□□□□□ -1.37
CHD2-202ENST00000420239 RRP1BQ14684 758 aaKnown RBP6.51□□□□□ -1.37
CHD2-202ENST00000420239 COL19A1Q14993 1142 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 NONOQ15233 471 aaKnown RBP eCLIP6.51□□□□□ -1.378e-6■□□□□ 8.2
CHD2-202ENST00000420239 EXOC3L4Q17RC7 722 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 WDR72Q3MJ13 1102 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 AADACL2Q6P093 401 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms