RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 PCDHB7Q9Y5E2 793 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 MARF1Q9Y4F3 1742 aaKnown RBP8.96□□□□□ -0.98
UBR4-206ENST00000419533 UPP2O95045 317 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 LCP1P13796 627 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 GUCY1A2P33402 732 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 PTGER2P43116 358 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 ZNF235Q14590 738 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 SGSM1Q2NKQ1 1148 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 RHOT1Q8IXI2 618 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 PCSK1NQ9UHG2 260 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 RRP15Q9Y3B9 282 aaKnown RBP8.96□□□□□ -0.98
UBR4-206ENST00000419533 FIS1Q9Y3D6 152 aa8.96□□□□□ -0.98
UBR4-206ENST00000419533 RIC1Q4ADV7 1423 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 GAS2O43903 313 aaKnown RBP8.95□□□□□ -0.98
UBR4-206ENST00000419533 KRT38O76015 456 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 FTLP02792 175 aaPredicted RBP8.95□□□□□ -0.98
UBR4-206ENST00000419533 ICAM1P05362 532 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 TRIM49P0CI25 452 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 TRIM49CP0CI26 452 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 STAG3L1P0CL83 205 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 YBX3P16989 372 aaKnown RBP eCLIP8.95□□□□□ -0.985e-11■□□□□ 9.9
UBR4-206ENST00000419533 HSD17B4P51659 736 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 BCAR1P56945 870 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 ST8SIA6P61647 398 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 STKLD1Q8NE28 680 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 MROH8Q9H579 483 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 DHX35Q9H5Z1 703 aaKnown RBP8.95□□□□□ -0.98
UBR4-206ENST00000419533 SLC13A4Q9UKG4 626 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.95□□□□□ -0.98
UBR4-206ENST00000419533 TTC36A6NLP5 189 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 PDHXO00330 501 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 ADCY2Q08462 1091 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 C6orf118Q5T5N4 469 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 EFCAB12Q6NXP0 572 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 CLEC10AQ8IUN9 316 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 ZBTB18Q99592 522 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 TUBB6Q9BUF5 446 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 HEMGNQ9BXL5 484 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 EDEM3Q9BZQ6 932 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 WNT8AQ9H1J5 351 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 PLEKHA5Q9HAU0 1116 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 TRPC7Q9HCX4 862 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 SAYSD1Q9NPB0 183 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.95□□□□□ -0.98
UBR4-206ENST00000419533 SNX9Q9Y5X1 595 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 PPP1R12AO14974 1030 aaPredicted RBP8.95□□□□□ -0.98
UBR4-206ENST00000419533 RPLP2P05387 115 aaKnown RBP8.95□□□□□ -0.98
UBR4-206ENST00000419533 IFNAR2P48551 515 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 ROR1Q01973 937 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 ATF7IP2Q5U623 682 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 CCDC197Q8NCU1 140 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 PDLIM2Q96JY6 352 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 MED15Q96RN5 788 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 SIK2Q9H0K1 926 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 ANKEF1Q9NU02 776 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 WDR35Q9P2L0 1181 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 TMEM247A6NEH6 219 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 KRT17Q04695 432 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 AP1B1Q10567 949 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 KCTD16Q68DU8 428 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 NOTUMQ6P988 496 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 SOCS4Q8WXH5 440 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 AGBL1Q96MI9 1066 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 FBXO2Q9UK22 296 aaPredicted RBP8.95□□□□□ -0.98
UBR4-206ENST00000419533 TRIM17Q9Y577 477 aa8.95□□□□□ -0.98
UBR4-206ENST00000419533 A0A1W2PQC6 194 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 ANO9A1A5B4 782 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 UNCXA6NJT0 531 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 PRRG1O14668 218 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 BAG2O95816 211 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 PCSK1P29120 753 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 GFPT1Q06210 699 aaPredicted RBP8.94□□□□□ -0.98
UBR4-206ENST00000419533 NSUN2Q08J23 767 aaKnown RBP eCLIP8.94□□□□□ -0.98
UBR4-206ENST00000419533 TERF2Q15554 542 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 ALS2CLQ60I27 953 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 CDC26Q8NHZ8 85 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 TTC8Q8TAM2 541 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 BCAS4Q8TDM0 211 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 EXT2Q93063 718 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 C7orf25Q9BPX7 421 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 EPB41L4AQ9HCS5 686 aaPredicted RBP8.94□□□□□ -0.98
UBR4-206ENST00000419533 HACD3Q9P035 362 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 TBK1Q9UHD2 729 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 BAIAP2L1Q9UHR4 511 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 SCAF8Q9UPN6 1271 aaKnown RBP8.94□□□□□ -0.98
UBR4-206ENST00000419533 CAPN7Q9Y6W3 813 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 E5RI56 91 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 GNGT2O14610 69 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 ATXN8OSP0DMR3 200 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 ZBTB48P10074 688 aaPredicted RBP8.94□□□□□ -0.98
UBR4-206ENST00000419533 SULT1E1P49888 294 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 RCN2Q14257 317 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 MUM1Q2TAK8 710 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 KLHL38Q2WGJ6 581 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 RNF25Q96BH1 459 aaPredicted RBP8.94□□□□□ -0.98
UBR4-206ENST00000419533 DRC3Q9H069 523 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 PDE11AQ9HCR9 933 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 ZNF212Q9UDV6 495 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 TMCC1O94876 653 aa8.94□□□□□ -0.98
UBR4-206ENST00000419533 CCT5P48643 541 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms