RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CTAGE4Q8IX94 777 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 ZNF710Q8N1W2 664 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 OLIG1Q8TAK6 271 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 PACSIN1Q9BY11 444 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 NRCAMQ92823 1304 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 DOCK3Q8IZD9 2030 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 EVPLQ92817 2033 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 TTLL13PA6NNM8 815 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 ALDH1A1P00352 501 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 TMEM253P0C7T8 217 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 GZMAP12544 262 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 TBXAS1P24557 533 aaPredicted RBP18.09■□□□□ 0.49
SSBP3-205ENST00000417664 BPIFB4P59827 614 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 ZNF568Q3ZCX4 644 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 TLK2Q86UE8 772 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 GPR161Q8N6U8 529 aaKnown RBP18.09■□□□□ 0.49
SSBP3-205ENST00000417664 LRRN4CLQ8ND94 238 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 SMC1BQ8NDV3 1235 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 FLRT1Q9NZU1 646 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 HYOU1Q9Y4L1 999 aa18.09■□□□□ 0.49
SSBP3-205ENST00000417664 ANKRD62A6NC57 917 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 ADCY6O43306 1168 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 BUB1O43683 1085 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 IL18RAPO95256 599 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 GJB1P08034 283 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 CRHR2Q13324 411 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 NAA30Q147X3 362 aaPredicted RBP18.08■□□□□ 0.48
SSBP3-205ENST00000417664 TMEM132AQ24JP5 1023 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 ZBTB41Q5SVQ8 909 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 ZBTB33Q86T24 672 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 EPS8L1Q8TE68 723 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 UBE2Q2Q8WVN8 375 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 CTNNBL1Q8WYA6 563 aaPredicted RBP18.08■□□□□ 0.48
SSBP3-205ENST00000417664 KAT5Q92993 513 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 IMPG2Q9BZV3 1241 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 RNF14Q9UBS8 474 aa18.08■□□□□ 0.48
SSBP3-205ENST00000417664 A0A087WZ62 844 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 TULP1O00294 542 aaPredicted RBP18.07■□□□□ 0.48
SSBP3-205ENST00000417664 B4GALT4O60513 344 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 MCF2P10911 925 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 HARSP12081 509 aaKnown RBP18.07■□□□□ 0.48
SSBP3-205ENST00000417664 CYP2B6P20813 491 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 USP8P40818 1118 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 PDE6CP51160 858 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 GALCP54803 685 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 WNT7BP56706 349 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 PCBP1Q15365 356 aaKnown RBP eCLIP18.07■□□□□ 0.481e-6■■■■□ 22.1
SSBP3-205ENST00000417664 DUOXA2Q1HG44 320 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 MARCH8Q5T0T0 291 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 ZNF677Q86XU0 584 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 TATDN2Q93075 761 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 FDXACB1Q9BRP7 624 aaPredicted RBP18.07■□□□□ 0.48
SSBP3-205ENST00000417664 AP5M1Q9H0R1 490 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 ISCUQ9H1K1 167 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 HDAC6Q9UBN7 1215 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.07■□□□□ 0.48
SSBP3-205ENST00000417664 NOCTQ9UK39 431 aaKnown RBP18.07■□□□□ 0.48
SSBP3-205ENST00000417664 ABT1Q9ULW3 272 aaKnown RBP18.07■□□□□ 0.48
SSBP3-205ENST00000417664 V9GYY5 206 aaPredicted RBP18.07■□□□□ 0.48
SSBP3-205ENST00000417664 NCANO14594 1321 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 MYH10P35580 1976 aa18.07■□□□□ 0.48
SSBP3-205ENST00000417664 KAT6AQ92794 2004 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 TMEM88BA6NKF7 163 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 PHACTR2O75167 634 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 PALMO75781 387 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 VNN1O95497 513 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 PRAMEF19Q5SWL8 479 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 KIAA0319LQ8IZA0 1049 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 SYCE1Q8N0S2 351 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 RFFLQ8WZ73 363 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 KATNAL1Q9BW62 490 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 CDT1Q9H211 546 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 MINDY3Q9H8M7 445 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 PTPRJQ12913 1337 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 MBLAC1A4D2B0 266 aaPredicted RBP18.06■□□□□ 0.48
SSBP3-205ENST00000417664 CYP26A1O43174 497 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 RTN2O75298 545 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 TUBBP07437 444 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 CYP11B1P15538 503 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 CYP2C19P33261 490 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 TNFSF9P41273 254 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 CDR2Q01850 454 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 ITIH3Q06033 890 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 NCOA4Q13772 614 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 TCEAL1Q15170 157 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 AMHR2Q16671 573 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 LMBRD2Q68DH5 695 aaPredicted RBP18.06■□□□□ 0.48
SSBP3-205ENST00000417664 NFRKBQ6P4R8 1299 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 RHOT2Q8IXI1 618 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 RPUSD2Q8IZ73 545 aaKnown RBP18.06■□□□□ 0.48
SSBP3-205ENST00000417664 GPBP1L1Q9HC44 474 aaPredicted RBP18.06■□□□□ 0.48
SSBP3-205ENST00000417664 SEPT11Q9NVA2 429 aaKnown RBP18.06■□□□□ 0.48
SSBP3-205ENST00000417664 PUF60Q9UHX1 559 aaKnown RBP18.06■□□□□ 0.48
SSBP3-205ENST00000417664 PCDHB2Q9Y5E7 798 aa18.06■□□□□ 0.48
SSBP3-205ENST00000417664 SMIM35A0A1B0GVV1 85 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 GRID2IPA4D2P6 1211 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 B4GALT5O43286 388 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 SGPL1O95470 568 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 VTNP04004 478 aa18.05■□□□□ 0.48
SSBP3-205ENST00000417664 CLTAP09496 248 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms