RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PDCL2Q8N4E4 241 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 PJA1Q8NG27 643 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 ZNF384Q8TF68 577 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 DNAAF4Q8WXU2 420 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 NELL1Q92832 810 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 UBL7Q96S82 380 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 DNAJC7Q99615 494 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 STK31Q9BXU1 1019 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 TEX13BQ9BXU2 312 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 KANSL2Q9H9L4 492 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 DISC1Q9NRI5 854 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 TJP2Q9UDY2 1190 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 CA14Q9ULX7 337 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 NEUROG3Q9Y4Z2 214 aa6.31□□□□□ -1.4
ECHDC1-206ENST00000417628 ITPR1Q14643 2758 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 SMG1Q96Q15 3661 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 KLHL33A6NCF5 533 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 ASB14A6NK59 587 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 TNFRSF10CO14798 259 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 NARSO43776 548 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 KPNA6O60684 536 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 EOMESO95936 686 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 TOP3BO95985 862 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 GLULP15104 373 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 MSNP26038 577 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 GUCY1A2P33402 732 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 PHKA1P46020 1223 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 CHMP4BP1P59074 171 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 ETF1P62495 437 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 TROAPQ12815 778 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 BTG3Q14201 252 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 SEPT2Q15019 361 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 ARSHQ5FYA8 562 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 KIAA1755Q5JYT7 1200 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 ZNF618Q5T7W0 954 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 FBXO16Q8IX29 292 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 SPICE1Q8N0Z3 855 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 REPS2Q8NFH8 660 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 SEPT8Q92599 483 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 LRIG1Q96JA1 1093 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 FANCD2OSQ96PS1 177 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 TACO1Q9BSH4 297 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 RUSC1Q9BVN2 902 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 ADAM7Q9H2U9 754 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 FBRSQ9HAH7 460 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 GRPEL1Q9HAV7 217 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 RC3H2Q9HBD1 1191 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 PDGFCQ9NRA1 345 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 KLHL3Q9UH77 587 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 SAP30BPQ9UHR5 308 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 DBR1Q9UK59 544 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 MYO7AQ13402 2215 aa6.3□□□□□ -1.4
ECHDC1-206ENST00000417628 SCN10AQ9Y5Y9 1956 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 ENO4A6NNW6 628 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 FAM229AH3BQW9 127 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 RBAK-RBAKDNI3L0D1 243 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 LOC400499M0QZD8 3231 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 GRM8O00222 908 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 FANCGO15287 622 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 DDAH1O94760 285 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 CCR10P46092 362 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 RAC1P63000 192 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 KCNC3Q14003 757 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 SYCP1Q15431 976 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 UVSSAQ2YD98 709 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 DUSP28Q4G0W2 176 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 PLEKHG4Q58EX7 1191 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 MRM1Q6IN84 353 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 TENM4Q6N022 2769 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 TAPT1Q6NXT6 567 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 C6orf15Q6UXA7 325 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 IGSF10Q6WRI0 2623 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 G2E3Q7L622 706 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 UBE3DQ7Z6J8 389 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 SESTD1Q86VW0 696 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 CELF5Q8N6W0 485 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 C12orf50Q8NA57 414 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 SMG8Q8ND04 991 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 RNF214Q8ND24 703 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 MYRIPQ8NFW9 859 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 OR6J1Q8NGC5 347 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 NEDD1Q8NHV4 660 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 TGFBRAP1Q8WUH2 860 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 TEP1Q99973 2627 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 FAM126AQ9BYI3 521 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 KCNK12Q9HB15 430 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 ARHGEF3Q9NR81 526 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 FBXO28Q9NVF7 368 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 SERPINB13Q9UIV8 391 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 HECTD1Q9ULT8 2610 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 PARP14Q460N5 1801 aa6.29□□□□□ -1.4
ECHDC1-206ENST00000417628 ANKRD62A6NC57 917 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 ENPP3O14638 875 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 ADH5P11766 374 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 HSD3B2P26439 372 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 POLR2BP30876 1174 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 CNTN2Q02246 1040 aa6.28□□□□□ -1.4
ECHDC1-206ENST00000417628 ATP2B3Q16720 1220 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms