RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FAM170BA6NMN3 283 aa19.89■□□□□ 0.77
VCP-202ENST00000417448 PP2D1A8MPX8 630 aa19.89■□□□□ 0.77
VCP-202ENST00000417448 GAS2O43903 313 aaKnown RBP19.89■□□□□ 0.77
VCP-202ENST00000417448 CDC25AP30304 524 aa19.89■□□□□ 0.77
VCP-202ENST00000417448 LILRA6Q6PI73 481 aa19.89■□□□□ 0.77
VCP-202ENST00000417448 GLYCTKQ8IVS8 523 aa19.89■□□□□ 0.77
VCP-202ENST00000417448 SECISBP2LQ93073 1101 aaKnown RBP19.89■□□□□ 0.77
VCP-202ENST00000417448 LXNQ9BS40 222 aa19.89■□□□□ 0.77
VCP-202ENST00000417448 INO80BQ9C086 356 aaPredicted RBP19.89■□□□□ 0.77
VCP-202ENST00000417448 LTB4R2Q9NPC1 389 aa19.89■□□□□ 0.77
VCP-202ENST00000417448 KANSL3Q9P2N6 904 aa19.89■□□□□ 0.77
VCP-202ENST00000417448 SUCLA2Q9P2R7 463 aaPredicted RBP19.89■□□□□ 0.77
VCP-202ENST00000417448 CNTNAP2Q9UHC6 1331 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 SLITRK3O94933 977 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 P4HBP07237 508 aaKnown RBP19.88■□□□□ 0.77
VCP-202ENST00000417448 FSHRP23945 695 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 HOXA11P31270 313 aaPredicted RBP19.88■□□□□ 0.77
VCP-202ENST00000417448 OR1G1P47890 313 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 QARSP47897 775 aaKnown RBP19.88■□□□□ 0.77
VCP-202ENST00000417448 NPEPPSP55786 919 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 PSMC5P62195 406 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 NTHL1P78549 312 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 PRKCQQ04759 706 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 ORC2Q13416 577 aaPredicted RBP19.88■□□□□ 0.77
VCP-202ENST00000417448 BECN1Q14457 450 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 SF3A1Q15459 793 aaKnown RBP19.88■□□□□ 0.77
VCP-202ENST00000417448 SLC44A4Q53GD3 710 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 OSBPL6Q9BZF3 934 aa19.88■□□□□ 0.77
VCP-202ENST00000417448 TFIP11Q9UBB9 837 aaKnown RBP19.88■□□□□ 0.77
VCP-202ENST00000417448 DAXXQ9UER7 740 aaPredicted RBP19.88■□□□□ 0.77
VCP-202ENST00000417448 CNOT1A5YKK6 2376 aaKnown RBP19.87■□□□□ 0.77
VCP-202ENST00000417448 MED24O75448 989 aa19.87■□□□□ 0.77
VCP-202ENST00000417448 RPL17P18621 184 aaKnown RBP19.87■□□□□ 0.77
VCP-202ENST00000417448 ATP2C1P98194 919 aaPredicted RBP19.87■□□□□ 0.77
VCP-202ENST00000417448 DSC1Q08554 894 aa19.87■□□□□ 0.77
VCP-202ENST00000417448 PPM1JQ5JR12 505 aa19.87■□□□□ 0.77
VCP-202ENST00000417448 ANO5Q75V66 913 aa19.87■□□□□ 0.77
VCP-202ENST00000417448 GRASPQ7Z6J2 395 aaPredicted RBP19.87■□□□□ 0.77
VCP-202ENST00000417448 SMG8Q8ND04 991 aaKnown RBP19.87■□□□□ 0.77
VCP-202ENST00000417448 CHAMP1Q96JM3 812 aa19.87■□□□□ 0.77
VCP-202ENST00000417448 MINDY3Q9H8M7 445 aa19.87■□□□□ 0.77
VCP-202ENST00000417448 BMP2KQ9NSY1 1161 aaPredicted RBP19.87■□□□□ 0.77
VCP-202ENST00000417448 CDH7Q9ULB5 785 aa19.87■□□□□ 0.77
VCP-202ENST00000417448 ZFP37Q9Y6Q3 630 aaPredicted RBP19.87■□□□□ 0.77
VCP-202ENST00000417448 FAM208BQ5VWN6 2430 aa19.87■□□□□ 0.77
VCP-202ENST00000417448 ASPMQ8IZT6 3477 aa19.87■□□□□ 0.77
VCP-202ENST00000417448 VWA3AA6NCI4 1184 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 MAFO75444 373 aaPredicted RBP19.86■□□□□ 0.77
VCP-202ENST00000417448 ZMYND10O75800 440 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 ZSCAN22P10073 491 aaPredicted RBP19.86■□□□□ 0.77
VCP-202ENST00000417448 TARSP26639 723 aaKnown RBP19.86■□□□□ 0.77
VCP-202ENST00000417448 DNM2P50570 870 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 GRIN1Q05586 938 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 ECM1Q16610 540 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 XKR3Q5GH77 459 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 PIGOQ8TEQ8 1089 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 CLDN23Q96B33 292 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 HSD17B14Q9BPX1 270 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 GPR62Q9BZJ7 368 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 RNF39Q9H2S5 420 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 PRMT8Q9NR22 394 aaPredicted RBP19.86■□□□□ 0.77
VCP-202ENST00000417448 MIOSQ9NXC5 875 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 ZDHHC9Q9Y397 364 aa19.86■□□□□ 0.77
VCP-202ENST00000417448 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.86■□□□□ 0.77
VCP-202ENST00000417448 CEP295Q9C0D2 2601 aa19.85■□□□□ 0.77
VCP-202ENST00000417448 TBC1D4O60343 1298 aa19.85■□□□□ 0.77
VCP-202ENST00000417448 C1RP00736 705 aa19.85■□□□□ 0.77
VCP-202ENST00000417448 NCLP19338 710 aaKnown RBP19.85■□□□□ 0.77
VCP-202ENST00000417448 DTHD1Q6ZMT9 781 aa19.85■□□□□ 0.77
VCP-202ENST00000417448 CATSPER3Q86XQ3 398 aa19.85■□□□□ 0.77
VCP-202ENST00000417448 FGF13Q92913 245 aa19.85■□□□□ 0.77
VCP-202ENST00000417448 USP28Q96RU2 1077 aa19.85■□□□□ 0.77
VCP-202ENST00000417448 LRWD1Q9UFC0 647 aa19.85■□□□□ 0.77
VCP-202ENST00000417448 RALGAPA1Q6GYQ0 2036 aa19.85■□□□□ 0.77
VCP-202ENST00000417448 SHISA7A6NL88 538 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 F13A1P00488 732 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 MARCKSP29966 332 aaPredicted RBP19.84■□□□□ 0.77
VCP-202ENST00000417448 MLH1P40692 756 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 MAGEA9P43362 315 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 FXR2P51116 673 aaKnown RBP eCLIP19.84■□□□□ 0.772e-6■■■□□ 15.8
VCP-202ENST00000417448 SPEM2Q0P670 501 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 FZD5Q13467 585 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 LPAL2Q16609 132 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 ZFP42Q96MM3 310 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 GAD1Q99259 594 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 PLIN2Q99541 437 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 KXD1Q9BQD3 176 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 ZSWIM4Q9H7M6 989 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 FNIP2Q9P278 1114 aa19.84■□□□□ 0.77
VCP-202ENST00000417448 ARL5CA6NH57 179 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 SLC30A4O14863 429 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 TDGF1P13385 188 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 YWHABP31946 246 aaKnown RBP19.83■□□□□ 0.77
VCP-202ENST00000417448 CCT6AP40227 531 aaKnown RBP19.83■□□□□ 0.77
VCP-202ENST00000417448 SCNN1GP51170 649 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 PTPAQ15257 358 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 ZRSR1Q15695 479 aaKnown RBP19.83■□□□□ 0.77
VCP-202ENST00000417448 XKR9Q5GH70 373 aa19.83■□□□□ 0.77
VCP-202ENST00000417448 ZBTB41Q5SVQ8 909 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms