RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 FAM186BQ8IYM0 893 aa8.78□□□□□ -1
MDC1-203ENST00000417033 GOLGA5Q8TBA6 731 aa8.78□□□□□ -1
MDC1-203ENST00000417033 CCDC51Q96ER9 411 aa8.78□□□□□ -1
MDC1-203ENST00000417033 BORCS6Q96GS4 357 aa8.78□□□□□ -1
MDC1-203ENST00000417033 SNX27Q96L92 541 aa8.78□□□□□ -1
MDC1-203ENST00000417033 FBXL18Q96ME1 805 aa8.78□□□□□ -1
MDC1-203ENST00000417033 ZFP42Q96MM3 310 aa8.78□□□□□ -1
MDC1-203ENST00000417033 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.78□□□□□ -14e-10■■□□□ 12.1
MDC1-203ENST00000417033 ADPGKQ9BRR6 497 aa8.78□□□□□ -1
MDC1-203ENST00000417033 TRIM6Q9C030 488 aaPredicted RBP8.78□□□□□ -1
MDC1-203ENST00000417033 PDE11AQ9HCR9 933 aa8.78□□□□□ -1
MDC1-203ENST00000417033 CHST12Q9NRB3 414 aa8.78□□□□□ -1
MDC1-203ENST00000417033 RGS18Q9NS28 235 aa8.78□□□□□ -1
MDC1-203ENST00000417033 TAB2Q9NYJ8 693 aa8.78□□□□□ -1
MDC1-203ENST00000417033 CXXC1Q9P0U4 656 aaPredicted RBP8.78□□□□□ -1
MDC1-203ENST00000417033 HCSTQ9UBK5 93 aa8.78□□□□□ -1
MDC1-203ENST00000417033 CACNG4Q9UBN1 327 aa8.78□□□□□ -1
MDC1-203ENST00000417033 PARP2Q9UGN5 583 aa8.78□□□□□ -1
MDC1-203ENST00000417033 PLAGL2Q9UPG8 496 aa8.78□□□□□ -1
MDC1-203ENST00000417033 COL4A6Q14031 1691 aa8.78□□□□□ -1
MDC1-203ENST00000417033 MICAL3Q7RTP6 2002 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 A0A0U1RQF3 1178 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 GRXCR2A6NFK2 248 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 LRRIQ3A6PVS8 624 aaPredicted RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 LACTBL1A8MY62 500 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 KCNJ18B7U540 433 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 H0YGN5 161 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 B4GALT3O60512 393 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 PARNO95453 639 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 NFICP08651 508 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 MLH1P40692 756 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 WDR5P61964 334 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 SNRPFP62306 86 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 NCBP1Q09161 790 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 PPIGQ13427 754 aaKnown RBP eCLIP8.77□□□□□ -1.012e-7■■■□□ 17.5
MDC1-203ENST00000417033 KCNJ12Q14500 433 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 SNRNP35Q16560 246 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 PTPN21Q16825 1174 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 CCDC40Q4G0X9 1142 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 CT47A1Q5JQC4 288 aaPredicted RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 CLLU1OSQ5K130 101 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 C9orf50Q5SZB4 431 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 FAM117BQ6P1L5 589 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 FOXR2Q6PJQ5 311 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 APTXQ7Z2E3 356 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 FILIP1Q7Z7B0 1213 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 MRPL10Q7Z7H8 261 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 CREBRFQ8IUR6 639 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 APBB2Q92870 758 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 ELMO3Q96BJ8 720 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 CCDC127Q96BQ5 260 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 CEP63Q96MT8 703 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 ZMAT2Q96NC0 199 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 GAD1Q99259 594 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 POP1Q99575 1024 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 NAT10Q9H0A0 1025 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 THAP9Q9H5L6 903 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 MIOSQ9NXC5 875 aa8.77□□□□□ -1.01
MDC1-203ENST00000417033 RBAKQ9NYW8 714 aaPredicted RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 CGNQ9P2M7 1197 aaKnown RBP8.77□□□□□ -1.01
MDC1-203ENST00000417033 TTC26A0AVF1 554 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 ZNF233A6NK53 670 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 SMTNL1A8MU46 457 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 BECN2A8MW95 431 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 PTGESO14684 152 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 SLC16A3O15427 465 aaKnown RBP8.76□□□□□ -1.01
MDC1-203ENST00000417033 LRRN2O75325 713 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 CLTAP09496 248 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 EPB41P11171 864 aaKnown RBP8.76□□□□□ -1.01
MDC1-203ENST00000417033 ITGA4P13612 1032 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 IGFBP6P24592 240 aaPredicted RBP8.76□□□□□ -1.01
MDC1-203ENST00000417033 RPL13P26373 211 aaKnown RBP8.76□□□□□ -1.01
MDC1-203ENST00000417033 PSMC2P35998 433 aaKnown RBP8.76□□□□□ -1.01
MDC1-203ENST00000417033 FAM189BP81408 668 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 SOX4Q06945 474 aaPredicted RBP8.76□□□□□ -1.01
MDC1-203ENST00000417033 PPP3CAQ08209 521 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 BFSP1Q12934 665 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 MYBPC2Q14324 1141 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 PSMD6Q15008 389 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 KRT31Q15323 416 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 ARSIQ5FYB1 569 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 DCAF17Q5H9S7 520 aaPredicted RBP8.76□□□□□ -1.01
MDC1-203ENST00000417033 JADE1Q6IE81 842 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 GPR153Q6NV75 609 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 SLC24A5Q71RS6 500 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 TRIM59Q8IWR1 403 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 CRIPAKQ8N1N5 446 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 GSTCDQ8NEC7 633 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 OR5B17Q8NGF7 314 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 HELQQ8TDG4 1101 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 TMEM174Q8WUU8 243 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 ZNF516Q92618 1163 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 C18orf25Q96B23 403 aaPredicted RBP8.76□□□□□ -1.01
MDC1-203ENST00000417033 MFSD14AQ96MC6 490 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 ACAP3Q96P50 834 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 MKNK1Q9BUB5 465 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 CCDC94Q9BW85 323 aaPredicted RBP8.76□□□□□ -1.01
MDC1-203ENST00000417033 TRAIPQ9BWF2 469 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 FTHL17Q9BXU8 183 aa8.76□□□□□ -1.01
MDC1-203ENST00000417033 MMRN2Q9H8L6 949 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms