RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ATF7IP2Q5U623 682 aa15.89■□□□□ 0.13
PAF1-202ENST00000416728 PDXDC1Q6P996 788 aa15.89■□□□□ 0.13
PAF1-202ENST00000416728 APBB1IPQ7Z5R6 666 aaPredicted RBP15.89■□□□□ 0.13
PAF1-202ENST00000416728 LNX1Q8TBB1 728 aaPredicted RBP15.89■□□□□ 0.13
PAF1-202ENST00000416728 CLSTN3Q9BQT9 956 aa15.89■□□□□ 0.13
PAF1-202ENST00000416728 CXCL16Q9H2A7 254 aa15.89■□□□□ 0.13
PAF1-202ENST00000416728 POLD4Q9HCU8 107 aa15.89■□□□□ 0.13
PAF1-202ENST00000416728 SH2B1Q9NRF2 756 aaPredicted RBP15.89■□□□□ 0.13
PAF1-202ENST00000416728 KIAA1024Q9UPX6 916 aa15.89■□□□□ 0.13
PAF1-202ENST00000416728 C2orf16Q68DN1 1984 aa15.89■□□□□ 0.13
PAF1-202ENST00000416728 PLXNA3P51805 1871 aa15.89■□□□□ 0.13
PAF1-202ENST00000416728 C8AP07357 584 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 HNRNPA1P09651 372 aaKnown RBP eCLIP15.88■□□□□ 0.13
PAF1-202ENST00000416728 SRFP11831 508 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 FSHRP23945 695 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 NBR1Q14596 966 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 GLRA4Q5JXX5 417 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 PPM1LQ5SGD2 360 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 CCDC105Q8IYK2 499 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 C4orf32Q8N8J7 132 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 SNX29Q8TEQ0 813 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 RAB34Q9BZG1 259 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 DDX19AQ9NUU7 478 aaKnown RBP15.88■□□□□ 0.13
PAF1-202ENST00000416728 STK24Q9Y6E0 443 aa15.88■□□□□ 0.13
PAF1-202ENST00000416728 K7ERI5 159 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 B3GAT3O94766 335 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 PDIA5Q14554 519 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 NT5DC1Q5TFE4 455 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.87■□□□□ 0.13
PAF1-202ENST00000416728 ASCL5Q7RTU5 278 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 GRASPQ7Z6J2 395 aaPredicted RBP15.87■□□□□ 0.13
PAF1-202ENST00000416728 CA14Q9ULX7 337 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 ZFP37Q9Y6Q3 630 aaPredicted RBP15.87■□□□□ 0.13
PAF1-202ENST00000416728 KRBA1A5PL33 1030 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 CCDC169A6NNP5 214 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 ANHXE9PGG2 379 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 TMEM189-UBE2V1I3L0A0 370 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 ADAM12O43184 909 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 XYLBO75191 536 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 U2AF2P26368 475 aaKnown RBP eCLIP15.87■□□□□ 0.13
PAF1-202ENST00000416728 HOXA9P31269 272 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 PTGDRQ13258 359 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 HTR4Q13639 388 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 IGSF22Q8N9C0 903 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 DTWD2Q8NBA8 298 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 GPR152Q8TDT2 470 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 UROC1Q96N76 676 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 PPP1R10Q96QC0 940 aaKnown RBP15.87■□□□□ 0.13
PAF1-202ENST00000416728 POLIQ9UNA4 740 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 DNM3Q9UQ16 869 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 TNFSF13BQ9Y275 285 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 NUMBLQ9Y6R0 609 aa15.87■□□□□ 0.13
PAF1-202ENST00000416728 PRR23AA6NEV1 266 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 CCL16O15467 120 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 FGFR3P22607 806 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 OR1D2P34982 312 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 NPTX2P47972 431 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 CLCNKBP51801 687 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 YARSP54577 528 aaKnown RBP15.86■□□□□ 0.13
PAF1-202ENST00000416728 PEX3P56589 373 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 DMP1Q13316 513 aaPredicted RBP15.86■□□□□ 0.13
PAF1-202ENST00000416728 RAB33AQ14088 237 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 ANGPT1Q15389 498 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 ZNF568Q3ZCX4 644 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 KRT79Q5XKE5 535 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 DCLRE1AQ6PJP8 1040 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 FRMD5Q7Z6J6 570 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 SLC7A14Q8TBB6 771 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 NKD2Q969F2 451 aaPredicted RBP15.86■□□□□ 0.13
PAF1-202ENST00000416728 CCDC94Q9BW85 323 aaPredicted RBP15.86■□□□□ 0.13
PAF1-202ENST00000416728 TBC1D17Q9HA65 648 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 ARHGEF3Q9NR81 526 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 TOPORSQ9NS56 1045 aaPredicted RBP15.86■□□□□ 0.13
PAF1-202ENST00000416728 CDH7Q9ULB5 785 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 PCDHB6Q9Y5E3 794 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 PHLPP2Q6ZVD8 1323 aa15.86■□□□□ 0.13
PAF1-202ENST00000416728 ZFHX2Q9C0A1 2572 aaPredicted RBP15.85■□□□□ 0.13
PAF1-202ENST00000416728 E9PMD0 336 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 LAD1O00515 517 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 TRAPPC3O43617 180 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 GRM5P41594 1212 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 TOB1P50616 345 aaPredicted RBP15.85■□□□□ 0.13
PAF1-202ENST00000416728 NTHL1P78549 312 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 UPP1Q16831 310 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 AXDND1Q5T1B0 1012 aaPredicted RBP15.85■□□□□ 0.13
PAF1-202ENST00000416728 ST13P5Q8NFI4 369 aaPredicted RBP15.85■□□□□ 0.13
PAF1-202ENST00000416728 DRC1Q96MC2 740 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 MRPL4Q9BYD3 311 aaKnown RBP15.85■□□□□ 0.13
PAF1-202ENST00000416728 CDT1Q9H211 546 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 GOLGA2P5Q9HBQ8 144 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 SLC2A4RGQ9NR83 387 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 MTRRQ9UBK8 725 aa15.85■□□□□ 0.13
PAF1-202ENST00000416728 SMIM28A0A1B0GU29 152 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 PP2D1A8MPX8 630 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 HIP1RO75146 1068 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 POU2F2P09086 479 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 IGFBP6P24592 240 aaPredicted RBP15.84■□□□□ 0.13
PAF1-202ENST00000416728 OSTNP61366 133 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 UVSSAQ2YD98 709 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 ANKS3Q6ZW76 656 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms