RNA–Protein interactions for RNA: ENST00000415624.5

TRAPPC12-204, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS ALT2 TSL 5

Gene TRAPPC12, Length 815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-204ENST00000415624 ATP1A3P13637 1013 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 SNRPFP62306 86 aaKnown RBP11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 TPM4P67936 248 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 FPGSQ05932 587 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 KCNJ12Q14500 433 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 SNRNP35Q16560 246 aaKnown RBP11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 DCAF17Q5H9S7 520 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 CNKSR3Q6P9H4 555 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 SLC9A9Q8IVB4 645 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 FAM114A1Q8IWE2 563 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 BRSK2Q8IWQ3 736 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 APBB2Q92870 758 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 KHSRPQ92945 711 aaKnown RBP eCLIP11.91□□□□□ -0.56e-11■■■□□ 18.6
TRAPPC12-204ENST00000415624 LPPQ93052 612 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 TIFAQ96CG3 184 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 FAM84AQ96KN4 292 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 GAS2L1Q99501 681 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 CCDC94Q9BW85 323 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 THAP9Q9H5L6 903 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 MMRN2Q9H8L6 949 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 DMAC2Q9NW81 257 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 SNTG2Q9NY99 539 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 TAB2Q9NYJ8 693 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 RBAKQ9NYW8 714 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 PCDHB2Q9Y5E7 798 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 WDFY4Q6ZS81 3184 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 TTC3P53804 2025 aa11.91□□□□□ -0.5
TRAPPC12-204ENST00000415624 ZDBF2Q9HCK1 2354 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 MEIS3P2A8K0S8 358 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 PES1O00541 588 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 KIAA0391O15091 583 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 GPR37L1O60883 481 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 TRIM49P0CI25 452 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 TRIM49CP0CI26 452 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 STAG3L1P0CL83 205 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 AKAP5P24588 427 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 PSMC2P35998 433 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 GRM5P41594 1212 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 MTIF2P46199 727 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 RAB27AP51159 221 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 WNT7BP56706 349 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 TFF2Q03403 129 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 CYP24A1Q07973 514 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 PPIGQ13427 754 aaKnown RBP eCLIP11.9□□□□□ -0.56e-7■■■■□ 21.9
TRAPPC12-204ENST00000415624 ENOX2Q16206 610 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 CDKAL1Q5VV42 579 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 TCERG1LQ5VWI1 586 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 FOXR2Q6PJQ5 311 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 CRELD2Q6UXH1 353 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 SMG8Q8ND04 991 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 VWCEQ96DN2 955 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 FTHL17Q9BXU8 183 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 HSD3B7Q9H2F3 369 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 RPF1Q9H9Y2 349 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 IL23AQ9NPF7 189 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 CHST12Q9NRB3 414 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 TOPORSQ9NS56 1045 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 RNF19AQ9NV58 838 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 KLK14Q9P0G3 267 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 CXXC1Q9P0U4 656 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 PARP2Q9UGN5 583 aa11.9□□□□□ -0.5
TRAPPC12-204ENST00000415624 FAM86C2PA6NEL3 165 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 ZNF233A6NK53 670 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 ZBBXA8MT70 800 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 LDHAP00338 332 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 CLTAP09496 248 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 ITGA4P13612 1032 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 KRT13P13646 458 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 MLH1P40692 756 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 KCNQ1P51787 676 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 SPAG1Q07617 926 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 MYBPC2Q14324 1141 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 GLRA4Q5JXX5 417 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 FILIP1Q7Z7B0 1213 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 RTN4RL1Q86UN2 441 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 ECHDC2Q86YB7 292 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 IRF2BP1Q8IU81 584 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 HACE1Q8IYU2 909 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 PLEKHO2Q8TD55 490 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 CCDC127Q96BQ5 260 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 ACAP3Q96P50 834 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 MKNK1Q9BUB5 465 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 RNF39Q9H2S5 420 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 PDE11AQ9HCR9 933 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 C1orf112Q9NSG2 853 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 ARMCX3Q9UH62 379 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 CPSF3Q9UKF6 684 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 INPP5FQ9Y2H2 1132 aa11.89□□□□□ -0.51
TRAPPC12-204ENST00000415624 COL4A6Q14031 1691 aa11.88□□□□□ -0.51
TRAPPC12-204ENST00000415624 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC12-204ENST00000415624 C9IYK1 514 aa11.88□□□□□ -0.51
TRAPPC12-204ENST00000415624 MEFVO15553 781 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC12-204ENST00000415624 GNA14O95837 355 aa11.88□□□□□ -0.51
TRAPPC12-204ENST00000415624 PFKMP08237 780 aa11.88□□□□□ -0.51
TRAPPC12-204ENST00000415624 NFICP08651 508 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms