RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 B4GALNT4Q76KP1 1039 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 GPD1LQ8N335 351 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 EIF1ADQ8N9N8 165 aaKnown RBP12.48□□□□□ -0.41
RFFL-205ENST00000415395 TMC2Q8TDI7 906 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 WHAMMQ8TF30 809 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 TAF4BQ92750 862 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 LRRC1Q9BTT6 524 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 LSM14BQ9BX40 385 aaKnown RBP12.48□□□□□ -0.41
RFFL-205ENST00000415395 CCDC113Q9H0I3 377 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 AP5M1Q9H0R1 490 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 PCIF1Q9H4Z3 704 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 ATXN2Q99700 1313 aaKnown RBP12.48□□□□□ -0.41
RFFL-205ENST00000415395 TISP43B9A030 160 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 ZNF263O14978 683 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 AOC2O75106 756 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 CPP00450 1065 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 RFX1P22670 979 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 KLRC1P26715 233 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 USP8P40818 1118 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 SKOR1P84550 965 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 SP3Q02447 781 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 DRP2Q13474 957 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 PRAMEF19Q5SWL8 479 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 CFAP58Q5T655 872 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 IFNLR1Q8IU57 520 aaPredicted RBP12.48□□□□□ -0.41
RFFL-205ENST00000415395 LRRC71Q8N4P6 559 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 MREGQ8N565 214 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 C1orf131Q8NDD1 294 aaKnown RBP12.48□□□□□ -0.41
RFFL-205ENST00000415395 BAP1Q92560 729 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 MFSD14AQ96MC6 490 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 KATNAL1Q9BW62 490 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 MRPL4Q9BYD3 311 aaKnown RBP12.48□□□□□ -0.41
RFFL-205ENST00000415395 GANQ9H2C0 597 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 LCMT1Q9UIC8 334 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 TFR2Q9UP52 801 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 DUSP10Q9Y6W6 482 aa12.48□□□□□ -0.41
RFFL-205ENST00000415395 AGPSO00116 658 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 TRIM66O15016 1216 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 EIF3HO15372 352 aaKnown RBP eCLIP12.47□□□□□ -0.41
RFFL-205ENST00000415395 EXTL3O43909 919 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 KPNA6O60684 536 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 DUSP11O75319 330 aaKnown RBP12.47□□□□□ -0.41
RFFL-205ENST00000415395 ZMYND10O75800 440 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 NOL4O94818 638 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 CYBAP13498 195 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 PON1P27169 355 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 GTF2H1P32780 548 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 IRAK1P51617 712 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 CDC42EP1Q00587 391 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 MYL7Q01449 175 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 GRIK4Q16099 956 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 MAPK6Q16659 721 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 NFRKBQ6P4R8 1299 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 MTHFD1LQ6UB35 978 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 FMNL3Q8IVF7 1028 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 RNF149Q8NC42 400 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 GCNT4Q9P109 453 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
RFFL-205ENST00000415395 ATP8B3O60423 1300 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 NRCAMQ92823 1304 aa12.47□□□□□ -0.41
RFFL-205ENST00000415395 GOLGA6L10A6NI86 522 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 ZNF233A6NK53 670 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 BTNL10A8MVZ5 291 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 EPHB6O15197 1021 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 MSCO60682 206 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 MYBL2P10244 700 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 PHKA2P46019 1235 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 FLT3LGP49771 235 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 PTENP60484 403 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 NKX3-2P78367 333 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 NAB2Q15742 525 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 FAM187BQ17R55 369 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 ASTE1Q2TB18 679 aaPredicted RBP12.46□□□□□ -0.41
RFFL-205ENST00000415395 KLHDC7AQ5VTJ3 777 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 DPY19L2P1Q6NXN4 242 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 TADA2BQ86TJ2 420 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 RHPN2Q8IUC4 686 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 ARFGAP2Q8N6H7 521 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 METTL13Q8N6R0 699 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 RDH13Q8NBN7 331 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 TRAPPC12Q8WVT3 735 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 VTI1AQ96AJ9 217 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 USP20Q9Y2K6 914 aa12.46□□□□□ -0.41
RFFL-205ENST00000415395 A0A0B4J269 797 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 SRRM3A6NNA2 597 aaPredicted RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 HAS3O00219 553 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 ZEB2O60315 1214 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 TOM1L1O75674 476 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 KIAA0754O94854 1291 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 GNRH1P01148 92 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 PRKCBP05771 671 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 ADRB2P07550 413 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 PLEKP08567 350 aaPredicted RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 HOXD10P28358 340 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 MATR3P43243 847 aaKnown RBP eCLIP12.45□□□□□ -0.42
RFFL-205ENST00000415395 CLCN3P51790 818 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 POLR2FP61218 127 aaKnown RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 GNGT1P63211 74 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 CYP24A1Q07973 514 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 ASIC2Q16515 512 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms