RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 PLEKHA4Q9H4M7 779 aa13.71□□□□□ -0.21
NCKIPSD-203ENST00000415281 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.71□□□□□ -0.21
NCKIPSD-203ENST00000415281 DDX19AQ9NUU7 478 aaKnown RBP13.71□□□□□ -0.21
NCKIPSD-203ENST00000415281 LRWD1Q9UFC0 647 aa13.71□□□□□ -0.21
NCKIPSD-203ENST00000415281 DUSP12Q9UNI6 340 aa13.71□□□□□ -0.21
NCKIPSD-203ENST00000415281 PDCD11Q14690 1871 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 ARHGEF35A5YM69 484 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 PROB1E7EW31 1015 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 ANHXE9PGG2 379 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 ZMYND10O75800 440 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 THP07101 528 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 FGFR3P22607 806 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 CCT6AP40227 531 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 TRAPPC10P48553 1259 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 CLCN5P51795 746 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 NUBP1P53384 320 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 FAM171A1Q5VUB5 890 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 C1orf186Q6ZWK4 172 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 ZBTB8OSQ8IWT0 167 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 TMEM130Q8N3G9 435 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 LRRC15Q8TF66 581 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 PIK3R5Q8WYR1 880 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 SMG7Q92540 1137 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 ACSF2Q96CM8 615 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 ZMAT2Q96NC0 199 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 PNMA5Q96PV4 448 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 C2orf40Q9H1Z8 148 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 GOLGA2P5Q9HBQ8 144 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 FBXW11Q9UKB1 542 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 MYH15Q9Y2K3 1946 aa13.7□□□□□ -0.22
NCKIPSD-203ENST00000415281 LAMP2P13473 410 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 PROZP22891 400 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 NPTX2P47972 431 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 CLCNKBP51801 687 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 HMGN5P82970 282 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 GLRA4Q5JXX5 417 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 ASCL5Q7RTU5 278 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 HACE1Q8IYU2 909 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 ACO2Q99798 780 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 RUSC1Q9BVN2 902 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 CDT1Q9H211 546 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 ZDHHC7Q9NXF8 308 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 IGSF9Q9P2J2 1179 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 TNFSF13BQ9Y275 285 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 GDAQ9Y2T3 454 aa13.69□□□□□ -0.22
NCKIPSD-203ENST00000415281 SMIM28A0A1B0GU29 152 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 SFI1A8K8P3 1242 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 I3L4J1 428 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 NR1I2O75469 434 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 LIG1P18858 919 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 AOC1P19801 751 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 PEX3P56589 373 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 HTR4Q13639 388 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 UPP1Q16831 310 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 ATF7IP2Q5U623 682 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 GRASPQ7Z6J2 395 aaPredicted RBP13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 ERMNQ8TAM6 284 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 DEPTORQ8TB45 409 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 ATOH1Q92858 354 aaPredicted RBP13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 ZBTB45Q96K62 511 aaPredicted RBP13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 NTPCRQ9BSD7 190 aaKnown RBP13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 TTPALQ9BTX7 342 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 HAPLN2Q9GZV7 340 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 ARHGAP28Q9P2N2 729 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 CITO14578 2027 aa13.68□□□□□ -0.22
NCKIPSD-203ENST00000415281 SF3B1O75533 1304 aaKnown RBP eCLIP13.67□□□□□ -0.221e-8■■■■■ 103.4
NCKIPSD-203ENST00000415281 TMEM189-UBE2V1I3L0A0 370 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 NRG2O14511 850 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 TBC1D4O60343 1298 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 HIP1RO75146 1068 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 CFHP08603 1231 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 GBP2P32456 591 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 NBL1P41271 181 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 BRCC3P46736 316 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 EFNA5P52803 228 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 RAB33AQ14088 237 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 PSMD5Q16401 504 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 HYIQ5T013 277 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 DCLRE1AQ6PJP8 1040 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 CEP57Q86XR8 500 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 SIX5Q8N196 739 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 FLCNQ8NFG4 579 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 ITFG1Q8TB96 612 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 SNX29Q8TEQ0 813 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 KIFAP3Q92845 792 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 FGF14Q92915 247 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 TARS2Q9BW92 718 aaKnown RBP13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 TMEM134Q9H6X4 195 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 HCFC1R1Q9NWW0 138 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 DLGAP2Q9P1A6 1054 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 WNT16Q9UBV4 365 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 ZNF292O60281 2723 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 MYH11P35749 1972 aa13.67□□□□□ -0.22
NCKIPSD-203ENST00000415281 K7ERI5 159 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 GJB2P29033 226 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 TKTP29401 623 aaKnown RBP13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 OR1D2P34982 312 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms