RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 PABPC1P11940 636 aaKnown RBP5.46□□□□□ -1.54
PTPRK-210ENST00000415055 HOXA5P20719 270 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 FLT3P36888 993 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 BUD31P41223 144 aaPredicted RBP5.46□□□□□ -1.54
PTPRK-210ENST00000415055 NHLH1Q02575 133 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 DDX10Q13206 875 aaKnown RBP5.46□□□□□ -1.54
PTPRK-210ENST00000415055 GORABQ5T7V8 394 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 ADAT2Q7Z6V5 191 aaKnown RBP5.46□□□□□ -1.54
PTPRK-210ENST00000415055 LRRTM3Q86VH5 581 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 ZNF227Q86WZ6 799 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 DDX42Q86XP3 938 aaKnown RBP eCLIP5.46□□□□□ -1.54
PTPRK-210ENST00000415055 MAPKAPK5Q8IW41 473 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 ARHGEF39Q8N4T4 335 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 AFAP1L2Q8N4X5 818 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 ANKS4BQ8N8V4 417 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 ADCY4Q8NFM4 1077 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 SH3RF3Q8TEJ3 882 aaPredicted RBP5.46□□□□□ -1.54
PTPRK-210ENST00000415055 TGFBRAP1Q8WUH2 860 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 DDX1Q92499 740 aaKnown RBP5.46□□□□□ -1.54
PTPRK-210ENST00000415055 VWCEQ96DN2 955 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 C8orf48Q96LL4 319 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 IER2Q9BTL4 223 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 ASPNQ9BXN1 380 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 RPAP3Q9H6T3 665 aaPredicted RBP5.46□□□□□ -1.54
PTPRK-210ENST00000415055 GPR160Q9UJ42 338 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 FBXL21Q9UKT6 434 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 PALD1Q9ULE6 856 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 DIS3Q9Y2L1 958 aaKnown RBP5.46□□□□□ -1.54
PTPRK-210ENST00000415055 ZNF451Q9Y4E5 1061 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 ZNF236Q9UL36 1845 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 MROH7Q68CQ1 1323 aa5.46□□□□□ -1.54
PTPRK-210ENST00000415055 SHOXO15266 292 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 CBFA2T2O43439 604 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 STRNO43815 780 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 CPP00450 1065 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 FGBP02675 491 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 ASLP04424 464 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 HLA-DOAP06340 250 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 ITGAVP06756 1048 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 ITGA4P13612 1032 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 MYOGP15173 224 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 VCAM1P19320 739 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 POU3F3P20264 500 aaPredicted RBP5.45□□□□□ -1.54
PTPRK-210ENST00000415055 CD247P20963 164 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 HOXC12P31275 282 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 L1CAMP32004 1257 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 CYP2C18P33260 490 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 ACLYP53396 1101 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 USP14P54578 494 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 TIMM10P62072 90 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 TEKQ02763 1124 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 GRB10Q13322 594 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 AUHQ13825 339 aaKnown RBP5.45□□□□□ -1.54
PTPRK-210ENST00000415055 HLTFQ14527 1009 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPRK-210ENST00000415055 DHCR24Q15392 516 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 FAM209AQ5JX71 171 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 FOXB2Q5VYV0 432 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 KRT40Q6A162 431 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 CATSPERGQ6ZRH7 1159 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 C16orf59Q7L2K0 433 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 MAMDC2Q7Z304 686 aaPredicted RBP5.45□□□□□ -1.54
PTPRK-210ENST00000415055 ATG9AQ7Z3C6 839 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 ZNF513Q8N8E2 541 aaPredicted RBP5.45□□□□□ -1.54
PTPRK-210ENST00000415055 BRF1Q92994 677 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 MAML3Q96JK9 1138 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 MRGPRX3Q96LB0 322 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 NEUROD6Q96NK8 337 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 MOV10L1Q9BXT6 1211 aaKnown RBP5.45□□□□□ -1.54
PTPRK-210ENST00000415055 DHX36Q9H2U1 1008 aaKnown RBP5.45□□□□□ -1.54
PTPRK-210ENST00000415055 AATFQ9NY61 560 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPRK-210ENST00000415055 APEX2Q9UBZ4 518 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 SFMBT1Q9UHJ3 866 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 CNOT6Q9ULM6 557 aaKnown RBP5.45□□□□□ -1.54
PTPRK-210ENST00000415055 COG5Q9UP83 839 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 EMC9Q9Y3B6 208 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 SPEF1Q9Y4P9 236 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 SLC4A7Q9Y6M7 1214 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 TET1Q8NFU7 2136 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 A0A0G2JMZ2 1700 aa5.45□□□□□ -1.54
PTPRK-210ENST00000415055 C5orf42Q9H799 3197 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 PI4K2BG5E9Z4 385 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 MEIS1O00470 390 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 BAG3O95817 575 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 MAP4K4O95819 1239 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-210ENST00000415055 C6orf222P0C671 652 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-210ENST00000415055 FCER1AP12319 257 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 AKR1A1P14550 325 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 CDKN1CP49918 316 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-210ENST00000415055 CCL23P55773 120 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 RBM10P98175 930 aaKnown RBP5.44□□□□□ -1.54
PTPRK-210ENST00000415055 MAP4K2Q12851 820 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 CBX2Q14781 532 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-210ENST00000415055 CLEC16AQ2KHT3 1053 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 ZNF385BQ569K4 471 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 BRDTQ58F21 947 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-210ENST00000415055 RNF219Q5W0B1 726 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-210ENST00000415055 NAA16Q6N069 864 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-210ENST00000415055 ATF7IPQ6VMQ6 1270 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 ANKRD33Q7Z3H0 272 aa5.44□□□□□ -1.54
PTPRK-210ENST00000415055 TMC3Q7Z5M5 1100 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms