RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 AKAP10O43572 662 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ZBTB14O43829 449 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 USO1O60763 962 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ZBED4O75132 1171 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 FARP2O94887 1054 aaPredicted RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 TGDSO95455 350 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 RPLP1P05386 114 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 GZMAP12544 262 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ACPPP15309 386 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 PECAM1P16284 738 aaPredicted RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 CES1P23141 567 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 MTHFRP42898 656 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 PIP4K2AP48426 406 aaPredicted RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 SEPHS1P49903 392 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 MRE11P49959 708 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 CCNHP51946 323 aaPredicted RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 PMS1P54277 932 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 GJA9P57773 515 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 LMNB2Q03252 620 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 UBXN1Q04323 297 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 PTPN12Q05209 780 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ITKQ08881 620 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 APOBRQ0VD83 1088 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 SREBF2Q12772 1141 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 TCIRG1Q13488 830 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 IKBKEQ14164 716 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 SART3Q15020 963 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ELF2Q15723 593 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ZNF124Q15973 351 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 HLFQ16534 295 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 TBC1D25Q3MII6 688 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ANKDD1AQ495B1 522 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 VWA3BQ502W6 1294 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 SLC10A5Q5PT55 438 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 EXOSC6Q5RKV6 272 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 VPS53Q5VIR6 699 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 CDPF1Q6NVV7 123 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 CNSTQ6PJW8 725 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 C1orf122Q6ZSJ8 110 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 NANOGNBQ7Z5D8 188 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 GALNT5Q7Z7M9 940 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ZBTB46Q86UZ6 589 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 GALNT13Q8IUC8 556 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 CCDC170Q8IYT3 715 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 PDCL2Q8N4E4 241 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 LINC00469Q8N7U9 141 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 NKAIN3Q8N8D7 197 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 C2CD4AQ8NCU7 369 aaPredicted RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 UTP15Q8TED0 518 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 BSNDQ8WZ55 320 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 GATA6Q92908 595 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ALKBH8Q96BT7 664 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 PPP1R14BQ96C90 147 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 NRBF2Q96F24 287 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ERO1AQ96HE7 468 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 JAKMIP1Q96N16 626 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 PPP1R9BQ96SB3 815 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 TUBA1CQ9BQE3 449 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 TEX13BQ9BXU2 312 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 TSGA10Q9BZW7 698 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 TRIM4Q9C037 500 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 KCTD10Q9H3F6 313 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 VCPKMTQ9H867 229 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 BRD9Q9H8M2 597 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ZWILCHQ9H900 591 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 KCNQ5Q9NR82 932 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 WDR35Q9P2L0 1181 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ARHGAP28Q9P2N2 729 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 MTRF1LQ9UGC7 380 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ZC3H7BQ9UGR2 993 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 HOOK1Q9UJC3 728 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 ZNF180Q9UJW8 692 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 HPCAL4Q9UM19 191 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 SCAF8Q9UPN6 1271 aaKnown RBP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 NIP7Q9Y221 180 aaKnown RBP eCLIP4.29□□□□□ -1.72
LINC01048-201ENST00000414480 DMTF1Q9Y222 760 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 TMX2Q9Y320 296 aa4.29□□□□□ -1.72
LINC01048-201ENST00000414480 KIF20BQ96Q89 1820 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 B4DLN1 442 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 INO80B-WBP1J3KQ70 363 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SGK1O00141 431 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CETN3O15182 167 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 PRPF3O43395 683 aaKnown RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 EIF4EBP3O60516 100 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 FOXD2O60548 495 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 TSPAN1O60635 241 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ICMTO60725 284 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ZNF254O75437 659 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ADCY5O95622 1261 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CAVIN2O95810 425 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CYP17A1P05093 508 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 PARP1P09874 1014 aaKnown RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ZSCAN22P10073 491 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SFTPCP11686 197 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 DRD2P14416 443 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ATF4P18848 351 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 GARTP22102 1010 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 EIF4BP23588 611 aaKnown RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 PBLDP30039 288 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ELF1P32519 619 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms