RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TRAPPC3O43617 180 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 LDHAP00338 332 aaKnown RBP16.04■□□□□ 0.16
CHD1-202ENST00000414220 URODP06132 367 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 CTSAP10619 480 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 NRIP1P48552 1158 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 PPP2R3AQ06190 1150 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 RBM23Q86U06 439 aaKnown RBP16.04■□□□□ 0.16
CHD1-202ENST00000414220 PPFIBP1Q86W92 1011 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 CEP120Q8N960 986 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 MRPL43Q8N983 215 aaKnown RBP16.04■□□□□ 0.16
CHD1-202ENST00000414220 POMGNT1Q8WZA1 660 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 PAGE5Q96GU1 130 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 CHMP5Q9NZZ3 219 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 ADAM28Q9UKQ2 775 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 HPSEQ9Y251 543 aa16.04■□□□□ 0.16
CHD1-202ENST00000414220 PRRC2BQ5JSZ5 2229 aaKnown RBP16.04■□□□□ 0.16
CHD1-202ENST00000414220 COL4A4P53420 1690 aaPredicted RBP16.04■□□□□ 0.16
CHD1-202ENST00000414220 SF3B1O75533 1304 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHD1-202ENST00000414220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.03■□□□□ 0.16
CHD1-202ENST00000414220 A0A0B4J269 797 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 FAM237AA0A1B0GTK4 181 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.03■□□□□ 0.16
CHD1-202ENST00000414220 CASTOR2A6NHX0 329 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 ABLIM1O14639 778 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 PTGESO14684 152 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 KIAA0391O15091 583 aaKnown RBP16.03■□□□□ 0.16
CHD1-202ENST00000414220 PPP1R37O75864 691 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 SOD2P04179 222 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 KCNE1P15382 129 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 NDUFV1P49821 464 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 POU5F1Q01860 360 aaKnown RBP16.03■□□□□ 0.16
CHD1-202ENST00000414220 CREMQ03060 361 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 HYAL1Q12794 435 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 PSMD2Q13200 908 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 XKR4Q5GH76 650 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 TJAP1Q5JTD0 557 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 GLRA4Q5JXX5 417 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 FAM26FQ5R3K3 315 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 ELMSAN1Q6PJG2 1045 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 DCLRE1AQ6PJP8 1040 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 EFHBQ8N7U6 833 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 SNX27Q96L92 541 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 ASB2Q96Q27 587 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 ZBP1Q9H171 429 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 BLZF1Q9H2G9 400 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 GDPD2Q9HCC8 539 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 CNTN3Q9P232 1028 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 HOOK1Q9UJC3 728 aaKnown RBP16.03■□□□□ 0.16
CHD1-202ENST00000414220 AGO2Q9UKV8 859 aaKnown RBP16.03■□□□□ 0.16
CHD1-202ENST00000414220 IRAK3Q9Y616 596 aa16.03■□□□□ 0.16
CHD1-202ENST00000414220 CHD7Q9P2D1 2997 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 EIF3DO15371 548 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHD1-202ENST00000414220 KIF20AO95235 890 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 MYBP10242 640 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 GARTP22102 1010 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 KCNA5P22460 613 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 RPL9P32969 192 aaKnown RBP16.02■□□□□ 0.16
CHD1-202ENST00000414220 GLUD2P49448 558 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 NDUFA8P51970 172 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 DUSP6Q16828 381 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 USP41Q3LFD5 358 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 PDXDC1Q6P996 788 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 ALKAL1Q6UXT8 129 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 TMEM173Q86WV6 379 aaPredicted RBP16.02■□□□□ 0.16
CHD1-202ENST00000414220 CHAMP1Q96JM3 812 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 PPP1R10Q96QC0 940 aaKnown RBP16.02■□□□□ 0.16
CHD1-202ENST00000414220 HERC2P3Q9BVR0 1158 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 STRA6Q9BX79 667 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 PRDM6Q9NQX0 595 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHD1-202ENST00000414220 EXOC1Q9NV70 894 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 STYXL1Q9Y6J8 313 aa16.02■□□□□ 0.16
CHD1-202ENST00000414220 UBE4BO95155 1302 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 C2orf71A6NGG8 1288 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 PER2O15055 1255 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 ACTN4O43707 911 aaKnown RBP16.01■□□□□ 0.15
CHD1-202ENST00000414220 B4GALT3O60512 393 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 B3GAT3O94766 335 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 PRPF6O94906 941 aaKnown RBP16.01■□□□□ 0.15
CHD1-202ENST00000414220 ZNF202O95125 648 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 SNRPFP62306 86 aaKnown RBP16.01■□□□□ 0.15
CHD1-202ENST00000414220 ADAM15Q13444 863 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 CUL4BQ13620 913 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 SLC10A6Q3KNW5 377 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 LEXMQ3ZCV2 418 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 SEZ6Q53EL9 994 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 FUT10Q6P4F1 479 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 HS2ST1Q7LGA3 356 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 ADGRD2Q7Z7M1 963 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 GPR65Q8IYL9 337 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 CASP10Q92851 521 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 FAM212AQ96EL1 285 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 ASB7Q9H672 318 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 MARCH5Q9NX47 278 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 DPP7Q9UHL4 492 aa16.01■□□□□ 0.15
CHD1-202ENST00000414220 UBQLN1Q9UMX0 589 aaKnown RBP16.01■□□□□ 0.15
CHD1-202ENST00000414220 HIDE1A8MVS5 230 aa16■□□□□ 0.15
CHD1-202ENST00000414220 ANKRD63C9JTQ0 380 aa16■□□□□ 0.15
CHD1-202ENST00000414220 TULP1O00294 542 aaPredicted RBP16■□□□□ 0.15
CHD1-202ENST00000414220 CXCL8P10145 99 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms