RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 APOL5Q9BWW9 433 aa16.22■□□□□ 0.19
LIMS4-201ENST00000413601 GPR62Q9BZJ7 368 aa16.22■□□□□ 0.19
LIMS4-201ENST00000413601 HAPLN2Q9GZV7 340 aa16.22■□□□□ 0.19
LIMS4-201ENST00000413601 CD320Q9NPF0 282 aa16.22■□□□□ 0.19
LIMS4-201ENST00000413601 MRPL17Q9NRX2 175 aaKnown RBP16.22■□□□□ 0.19
LIMS4-201ENST00000413601 ADAM28Q9UKQ2 775 aa16.22■□□□□ 0.19
LIMS4-201ENST00000413601 HCFC2Q9Y5Z7 792 aa16.22■□□□□ 0.19
LIMS4-201ENST00000413601 C2orf16Q68DN1 1984 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 SMIM28A0A1B0GU29 152 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 CLDN3O15551 220 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 LILRB3O75022 631 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 TADA2AO75478 443 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 URODP06132 367 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 LIG4P49917 911 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 ZC2HC1CQ53FD0 456 aaPredicted RBP16.21■□□□□ 0.19
LIMS4-201ENST00000413601 AXDND1Q5T1B0 1012 aaPredicted RBP16.21■□□□□ 0.19
LIMS4-201ENST00000413601 ATL3Q6DD88 541 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 ANKRD54Q6NXT1 300 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 FUT10Q6P4F1 479 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 SHC4Q6S5L8 630 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 ALKAL1Q6UXT8 129 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 SFR1Q86XK3 245 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 HASPINQ8TF76 798 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 CASP10Q92851 521 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 KCNN1Q92952 543 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 DNAJC19Q96DA6 116 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 B3GALT6Q96L58 329 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 KLHL5Q96PQ7 755 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 PPP1R10Q96QC0 940 aaKnown RBP16.21■□□□□ 0.19
LIMS4-201ENST00000413601 TOPORSQ9NS56 1045 aaPredicted RBP16.21■□□□□ 0.19
LIMS4-201ENST00000413601 CUL9Q8IWT3 2517 aa16.21■□□□□ 0.19
LIMS4-201ENST00000413601 HNRNPDLO14979 420 aaKnown RBP16.2■□□□□ 0.18
LIMS4-201ENST00000413601 MEFVO15553 781 aaPredicted RBP16.2■□□□□ 0.18
LIMS4-201ENST00000413601 KIF4AO95239 1232 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 CNPP09543 421 aaKnown RBP16.2■□□□□ 0.18
LIMS4-201ENST00000413601 EPCAMP16422 314 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 SCP2P22307 547 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 ME1P48163 572 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 GLUD2P49448 558 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 GTF2BQ00403 316 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 MCL1Q07820 350 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 XKR4Q5GH76 650 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 KIAA0319Q5VV43 1072 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 KIAA1841Q6NSI8 718 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 SYCE2Q6PIF2 218 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 KCNG4Q8TDN1 519 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 SLC22A17Q8WUG5 538 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 STAMQ92783 540 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 SNX27Q96L92 541 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 EMILIN2Q9BXX0 1053 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 GOLGA2P5Q9HBQ8 144 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 TBC1D7Q9P0N9 293 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 CFAP45Q9UL16 551 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 ZDHHC9Q9Y397 364 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 USP15Q9Y4E8 981 aaPredicted RBP16.2■□□□□ 0.18
LIMS4-201ENST00000413601 C5orf42Q9H799 3197 aa16.2■□□□□ 0.18
LIMS4-201ENST00000413601 NCOR1O75376 2440 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 IGFBP6P24592 240 aaPredicted RBP16.19■□□□□ 0.18
LIMS4-201ENST00000413601 KLRC2P26717 231 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 SSTR3P32745 418 aaPredicted RBP16.19■□□□□ 0.18
LIMS4-201ENST00000413601 DSG1Q02413 1049 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 ZP2Q05996 745 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 SOX4Q06945 474 aaPredicted RBP16.19■□□□□ 0.18
LIMS4-201ENST00000413601 USP41Q3LFD5 358 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 ADHFE1Q8IWW8 467 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 DHX58Q96C10 678 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 CHAMP1Q96JM3 812 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 ZMAT2Q96NC0 199 aaKnown RBP16.19■□□□□ 0.18
LIMS4-201ENST00000413601 S1PR5Q9H228 398 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 CHST7Q9NS84 486 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 PRKAG3Q9UGI9 489 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 SSX2IPQ9Y2D8 614 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 TTC28Q96AY4 2481 aa16.19■□□□□ 0.18
LIMS4-201ENST00000413601 SF3B1O75533 1304 aaKnown RBP eCLIP16.19■□□□□ 0.18
LIMS4-201ENST00000413601 PIGRP01833 764 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 IDEP14735 1019 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 KCNE1P15382 129 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 HOXB8P17481 243 aaPredicted RBP16.18■□□□□ 0.18
LIMS4-201ENST00000413601 GAP43P17677 238 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 ABCD1P33897 745 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 CLCN4P51793 760 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 CLCNKBP51801 687 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 E2F4Q16254 413 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 SLC10A6Q3KNW5 377 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 SLC39A4Q6P5W5 647 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 ZNF720Q7Z2F6 126 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 PPFIBP1Q86W92 1011 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 MAP4K3Q8IVH8 894 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 GJD3Q8N144 294 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 RIN2Q8WYP3 895 aaPredicted RBP16.18■□□□□ 0.18
LIMS4-201ENST00000413601 ST6GALNAC4Q9H4F1 302 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
LIMS4-201ENST00000413601 CNTN3Q9P232 1028 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 RCOR1Q9UKL0 485 aa16.18■□□□□ 0.18
LIMS4-201ENST00000413601 TISP43B9A030 160 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 ANKRD63C9JTQ0 380 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 TEX28O15482 410 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 CXCL8P10145 99 aa16.17■□□□□ 0.18
LIMS4-201ENST00000413601 TNFSF9P41273 254 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms