RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 GMEB2Q9UKD1 530 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 POLIQ9UNA4 740 aa10.62□□□□□ -0.71
RFFL-203ENST00000413582 ZBTB39O15060 712 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 ABCB7O75027 752 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 TADA2AO75478 443 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 ECI2O75521 394 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 NPTXRO95502 500 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 CCT2P78371 535 aaKnown RBP10.61□□□□□ -0.71
RFFL-203ENST00000413582 POU5F1BQ06416 359 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 SPIRE1Q08AE8 756 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 MTAPQ13126 283 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 TUSC3Q13454 348 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 INF2Q27J81 1249 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 PABPC1LQ4VXU2 614 aaKnown RBP10.61□□□□□ -0.71
RFFL-203ENST00000413582 XKR9Q5GH70 373 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 FAM171A1Q5VUB5 890 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 SLC27A1Q6PCB7 646 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 CDR2LQ86X02 465 aaPredicted RBP10.61□□□□□ -0.71
RFFL-203ENST00000413582 ZNF687Q8N1G0 1237 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 ING5Q8WYH8 240 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 HAS1Q92839 578 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 FAM20AQ96MK3 541 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 NELL2Q99435 816 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 NFKBIZQ9BYH8 718 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 FAM126AQ9BYI3 521 aaPredicted RBP10.61□□□□□ -0.71
RFFL-203ENST00000413582 HEBP1Q9NRV9 189 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 RGL1Q9NZL6 768 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 DNMT3BQ9UBC3 853 aaKnown RBP10.61□□□□□ -0.71
RFFL-203ENST00000413582 KCNH3Q9ULD8 1083 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 CEP295Q9C0D2 2601 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 BAHCC1Q9P281 2608 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 ATRXP46100 2492 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 SDK1Q7Z5N4 2213 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 TRIP11Q15643 1979 aa10.61□□□□□ -0.71
RFFL-203ENST00000413582 TICRRQ7Z2Z1 1910 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 CASTOR2A6NHX0 329 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 PTGESO14684 152 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 SLC30A4O14863 429 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 NCAM2O15394 837 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 RPS6KB1P23443 525 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 PDIA3P30101 505 aaKnown RBP10.6□□□□□ -0.71
RFFL-203ENST00000413582 EVCP57679 992 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 CYP4A11Q02928 519 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 ADCY1Q08828 1119 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 NCBP1Q09161 790 aaKnown RBP10.6□□□□□ -0.71
RFFL-203ENST00000413582 TFDP1Q14186 410 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 EPHA7Q15375 998 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 SLC5A9Q2M3M2 681 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 C8orf34Q49A92 452 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 PPM1JQ5JR12 505 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 AXDND1Q5T1B0 1012 aaPredicted RBP10.6□□□□□ -0.71
RFFL-203ENST00000413582 BLOC1S2Q6QNY1 142 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 POTEHQ6S545 545 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 ZNF852Q6ZMS4 543 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 OTUD6AQ7L8S5 288 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 KRT25Q7Z3Z0 450 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 CEP57Q86XR8 500 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 TRIM22Q8IYM9 498 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 NETO1Q8TDF5 533 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 DYDC2Q96IM9 177 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 AIFM3Q96NN9 605 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 PLA2G2FQ9BZM2 168 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 SLKQ9H2G2 1235 aaPredicted RBP10.6□□□□□ -0.71
RFFL-203ENST00000413582 CHRDQ9H2X0 955 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 ZSWIM4Q9H7M6 989 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 PARP2Q9UGN5 583 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.6□□□□□ -0.71
RFFL-203ENST00000413582 SPAG17Q6Q759 2223 aa10.6□□□□□ -0.71
RFFL-203ENST00000413582 A0A1B0GUA9 196 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 GCFC2P16383 781 aaKnown RBP10.59□□□□□ -0.71
RFFL-203ENST00000413582 GLRA2P23416 452 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 FCARP24071 287 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 ARL2P36404 184 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 SPEM2Q0P670 501 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 RAB33AQ14088 237 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 CTTNQ14247 550 aaKnown RBP10.59□□□□□ -0.71
RFFL-203ENST00000413582 NAB2Q15742 525 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 LPAL2Q16609 132 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 LAIR1Q6GTX8 287 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 NCAPH2Q6IBW4 605 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 PPP4R3AQ6IN85 833 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 GALNT17Q6IS24 598 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 PDXDC1Q6P996 788 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.59□□□□□ -0.71
RFFL-203ENST00000413582 NEK8Q86SG6 692 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 FAM177A1Q8N128 213 aaPredicted RBP10.59□□□□□ -0.71
RFFL-203ENST00000413582 DNASE1L2Q92874 299 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 CXCL16Q9H2A7 254 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 GDE1Q9NZC3 331 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 MTRRQ9UBK8 725 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 MRPS17Q9Y2R5 130 aaKnown RBP10.59□□□□□ -0.71
RFFL-203ENST00000413582 MRPS23Q9Y3D9 190 aaKnown RBP10.59□□□□□ -0.71
RFFL-203ENST00000413582 SNX14Q9Y5W7 946 aa10.59□□□□□ -0.71
RFFL-203ENST00000413582 TBX3O15119 743 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 EPB41L2O43491 1005 aaKnown RBP10.58□□□□□ -0.72
RFFL-203ENST00000413582 LRP3O75074 770 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 DGAT1O75907 488 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 RECQL4O94761 1208 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 DEXIO95424 95 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 RHOP08100 348 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms