RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 NR3C1P04150 777 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 NR3C2P08235 984 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 MYCLP12524 364 aaPredicted RBP18.62■□□□□ 0.57
PTPRC-206ENST00000413409 DNAJB1P25685 340 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 KRT83P78385 493 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 MAPK7Q13164 816 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 ARHGAP29Q52LW3 1261 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 ANKRD7Q92527 254 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 SEPT8Q92599 483 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 MAP7D2Q96T17 732 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 MPHOSPH6Q99547 160 aaKnown RBP18.62■□□□□ 0.57
PTPRC-206ENST00000413409 EIF3CQ99613 913 aaKnown RBP18.62■□□□□ 0.57
PTPRC-206ENST00000413409 CHP1Q99653 195 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 MKNK1Q9BUB5 465 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 CEP72Q9P209 647 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 ARMCX3Q9UH62 379 aaPredicted RBP18.62■□□□□ 0.57
PTPRC-206ENST00000413409 PLAGL2Q9UPG8 496 aa18.62■□□□□ 0.57
PTPRC-206ENST00000413409 USP15Q9Y4E8 981 aaPredicted RBP18.62■□□□□ 0.57
PTPRC-206ENST00000413409 MED19A0JLT2 244 aaPredicted RBP18.61■□□□□ 0.57
PTPRC-206ENST00000413409 FANCGO15287 622 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 PPP1R37O75864 691 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 EPB41P11171 864 aaKnown RBP18.61■□□□□ 0.57
PTPRC-206ENST00000413409 ARHGAP25P42331 645 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 RARRES1P49788 294 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 PSMC5P62195 406 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 MYBPC2Q14324 1141 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 PDXDC1Q6P996 788 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 PADI6Q6TGC4 694 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 BAP1Q92560 729 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 SYN2Q92777 582 aaPredicted RBP18.61■□□□□ 0.57
PTPRC-206ENST00000413409 RPGRIP1Q96KN7 1286 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 WDR24Q96S15 920 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 STRA6Q9BX79 667 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 MMRN2Q9H8L6 949 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 ANKEF1Q9NU02 776 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 PKD2L1Q9P0L9 805 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 DDX41Q9UJV9 622 aaKnown RBP18.61■□□□□ 0.57
PTPRC-206ENST00000413409 REXO2Q9Y3B8 237 aaKnown RBP18.61■□□□□ 0.57
PTPRC-206ENST00000413409 PCDHB13Q9Y5F0 798 aa18.61■□□□□ 0.57
PTPRC-206ENST00000413409 EP300Q09472 2414 aaPredicted RBP18.6■□□□□ 0.57
PTPRC-206ENST00000413409 DKC1O60832 514 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTPRC-206ENST00000413409 HIP1RO75146 1068 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 IPO7O95373 1038 aaKnown RBP18.6■□□□□ 0.57
PTPRC-206ENST00000413409 GLP2RO95838 553 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 NUBP1P53384 320 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 NCBP1Q09161 790 aaKnown RBP18.6■□□□□ 0.57
PTPRC-206ENST00000413409 KCNMA1Q12791 1236 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 TUBB2AQ13885 445 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 ZNF720Q7Z2F6 126 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 SMAP1Q8IYB5 467 aaPredicted RBP18.6■□□□□ 0.57
PTPRC-206ENST00000413409 CLP1Q92989 425 aaKnown RBP18.6■□□□□ 0.57
PTPRC-206ENST00000413409 TUBB2BQ9BVA1 445 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 KATNAL1Q9BW62 490 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 PHF7Q9BWX1 381 aaPredicted RBP18.6■□□□□ 0.57
PTPRC-206ENST00000413409 HAUS4Q9H6D7 363 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 RC3H2Q9HBD1 1191 aaKnown RBP18.6■□□□□ 0.57
PTPRC-206ENST00000413409 LZTFL1Q9NQ48 299 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 FAM207AQ9NSI2 230 aaPredicted RBP18.6■□□□□ 0.57
PTPRC-206ENST00000413409 ZNF215Q9UL58 517 aaPredicted RBP18.6■□□□□ 0.57
PTPRC-206ENST00000413409 MYH11P35749 1972 aa18.6■□□□□ 0.57
PTPRC-206ENST00000413409 ARID2Q68CP9 1835 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 ZBTB39O15060 712 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 EPHB6O15197 1021 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 TGFB1I1O43294 461 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 AFPP02771 609 aaKnown RBP18.59■□□□□ 0.57
PTPRC-206ENST00000413409 NMT1P30419 496 aaKnown RBP18.59■□□□□ 0.57
PTPRC-206ENST00000413409 ICAM3P32942 547 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 GNPTABQ3T906 1256 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 ODR4Q5SWX8 454 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 HS2ST1Q7LGA3 356 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 DHX37Q8IY37 1157 aaKnown RBP18.59■□□□□ 0.57
PTPRC-206ENST00000413409 DAW1Q8N136 415 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 ZNF710Q8N1W2 664 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 EFHBQ8N7U6 833 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 EHBP1Q8NDI1 1231 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 TMEM174Q8WUU8 243 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 EMID1Q96A84 441 aaPredicted RBP18.59■□□□□ 0.57
PTPRC-206ENST00000413409 RIPOR3Q96MK2 946 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 IWS1Q96ST2 819 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 LSM14BQ9BX40 385 aaKnown RBP18.59■□□□□ 0.57
PTPRC-206ENST00000413409 ST6GALNAC4Q9H4F1 302 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 NHEJ1Q9H9Q4 299 aaPredicted RBP18.59■□□□□ 0.57
PTPRC-206ENST00000413409 LARSQ9P2J5 1176 aaKnown RBP18.59■□□□□ 0.57
PTPRC-206ENST00000413409 CGNQ9P2M7 1197 aaKnown RBP18.59■□□□□ 0.57
PTPRC-206ENST00000413409 BARX2Q9UMQ3 279 aaPredicted RBP18.59■□□□□ 0.57
PTPRC-206ENST00000413409 SAMM50Q9Y512 469 aa18.59■□□□□ 0.57
PTPRC-206ENST00000413409 CACNA1GO43497 2377 aa18.58■□□□□ 0.57
PTPRC-206ENST00000413409 TPRP12270 2363 aaKnown RBP18.58■□□□□ 0.57
PTPRC-206ENST00000413409 CCNE2O96020 404 aa18.58■□□□□ 0.57
PTPRC-206ENST00000413409 HOXD8P13378 290 aaPredicted RBP18.58■□□□□ 0.57
PTPRC-206ENST00000413409 KCNA2P16389 499 aa18.58■□□□□ 0.57
PTPRC-206ENST00000413409 YWHABP31946 246 aaKnown RBP18.58■□□□□ 0.57
PTPRC-206ENST00000413409 SLC9A9Q8IVB4 645 aa18.58■□□□□ 0.57
PTPRC-206ENST00000413409 PPTC7Q8NI37 304 aa18.58■□□□□ 0.57
PTPRC-206ENST00000413409 DRC1Q96MC2 740 aa18.58■□□□□ 0.57
PTPRC-206ENST00000413409 CCDC43Q96MW1 224 aaKnown RBP18.58■□□□□ 0.57
PTPRC-206ENST00000413409 PLCB1Q9NQ66 1216 aa18.58■□□□□ 0.57
PTPRC-206ENST00000413409 MRFAP1Q9Y605 127 aa18.58■□□□□ 0.57
PTPRC-206ENST00000413409 ZFHX4Q86UP3 3567 aa18.57■□□□□ 0.56
PTPRC-206ENST00000413409 SSU72P8A0A1W2PR75 194 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms