RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 RNF169Q8NCN4 708 aa28.17■■■□□ 2.1
RHBDD3-203ENST00000413137 PARP2Q9UGN5 583 aa28.17■■■□□ 2.1
RHBDD3-203ENST00000413137 TTC26A0AVF1 554 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 SERPINC1P01008 464 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 KRT13P13646 458 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 EPHB4P54760 987 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 FAM189BP81408 668 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 KYAT1Q16773 422 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 TCERG1LQ5VWI1 586 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 AGMOQ6ZNB7 445 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 ZNF598Q86UK7 904 aaKnown RBP28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 TMEM130Q8N3G9 435 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 IFNKQ9P0W0 207 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 RAB27AP51159 221 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 AFF1P51825 1210 aaKnown RBP28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 PPP3CAQ08209 521 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 MAN2A1Q16706 1144 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 PTPN21Q16825 1174 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 ALKAL1Q6UXT8 129 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 TMC2Q8TDI7 906 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 ZNF516Q92618 1163 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 INTS13Q9NVM9 706 aa28.16■■■□□ 2.1
RHBDD3-203ENST00000413137 ITGA4P13612 1032 aa28.15■■■□□ 2.1
RHBDD3-203ENST00000413137 KCNH2Q12809 1159 aa28.15■■■□□ 2.1
RHBDD3-203ENST00000413137 VWA3BQ502W6 1294 aa28.15■■■□□ 2.1
RHBDD3-203ENST00000413137 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.15■■■□□ 2.1
RHBDD3-203ENST00000413137 SNX27Q96L92 541 aa28.15■■■□□ 2.1
RHBDD3-203ENST00000413137 MMRN2Q9H8L6 949 aa28.15■■■□□ 2.1
RHBDD3-203ENST00000413137 IL23AQ9NPF7 189 aa28.15■■■□□ 2.1
RHBDD3-203ENST00000413137 SCARA3Q6AZY7 606 aa28.14■■■□□ 2.1
RHBDD3-203ENST00000413137 EFCAB13Q8IY85 973 aa28.14■■■□□ 2.1
RHBDD3-203ENST00000413137 ZFP42Q96MM3 310 aa28.14■■■□□ 2.1
RHBDD3-203ENST00000413137 ZMAT2Q96NC0 199 aaKnown RBP28.14■■■□□ 2.1
RHBDD3-203ENST00000413137 C1orf112Q9NSG2 853 aa28.14■■■□□ 2.1
RHBDD3-203ENST00000413137 TEX33O43247 280 aa28.13■■■□□ 2.09
RHBDD3-203ENST00000413137 NFICP08651 508 aa28.13■■■□□ 2.09
RHBDD3-203ENST00000413137 CLDN10P78369 228 aa28.13■■■□□ 2.09
RHBDD3-203ENST00000413137 FPGSQ05932 587 aa28.13■■■□□ 2.09
RHBDD3-203ENST00000413137 IKBKEQ14164 716 aa28.13■■■□□ 2.09
RHBDD3-203ENST00000413137 RPUSD2Q8IZ73 545 aaKnown RBP28.13■■■□□ 2.09
RHBDD3-203ENST00000413137 ANKRD20A12PQ8NF67 263 aa28.13■■■□□ 2.09
RHBDD3-203ENST00000413137 OR5B17Q8NGF7 314 aa28.13■■■□□ 2.09
RHBDD3-203ENST00000413137 NDST4Q9H3R1 872 aa28.13■■■□□ 2.09
RHBDD3-203ENST00000413137 A0A1B0GTH6 734 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 GCLMP48507 274 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 YARSP54577 528 aaKnown RBP28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 UBASH3AP57075 661 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 POU5F1Q01860 360 aaKnown RBP28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 CBWD6Q4V339 395 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 CBWD3Q5JTY5 395 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 GLRA4Q5JXX5 417 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 CBWD5Q5RIA9 395 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 JADE1Q6IE81 842 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 SARM1Q6SZW1 724 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 FNBP1Q96RU3 617 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 CGRRF1Q99675 332 aa28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 XPO4Q9C0E2 1151 aaKnown RBP28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 RTN4Q9NQC3 1192 aaKnown RBP28.12■■■□□ 2.09
RHBDD3-203ENST00000413137 PES1O00541 588 aaKnown RBP28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 MLH1P40692 756 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 PPP2R3AQ06190 1150 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 HSP90AA2PQ14568 343 aaPredicted RBP28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 CRIPAKQ8N1N5 446 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 GSTCDQ8NEC7 633 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 GAD1Q99259 594 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 PLEKHA5Q9HAU0 1116 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 PLAGL2Q9UPG8 496 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 LTBP2Q14767 1821 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 LGALS16A8MUM7 142 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 IL18RAPO95256 599 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 FGFR1P11362 822 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 SKIP12755 728 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 TNNI1P19237 187 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 PPIGQ13427 754 aaKnown RBP eCLIP28.11■■■□□ 2.093e-6■□□□□ 10.9
RHBDD3-203ENST00000413137 NR1I3Q14994 352 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 XKR4Q5GH76 650 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 ZNF365Q70YC5 407 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 OTOP2Q7RTS6 562 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 MIOSQ9NXC5 875 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 CNTN3Q9P232 1028 aa28.11■■■□□ 2.09
RHBDD3-203ENST00000413137 ARL5CA6NH57 179 aa28.1■■■□□ 2.09
RHBDD3-203ENST00000413137 PTGESO14684 152 aa28.1■■■□□ 2.09
RHBDD3-203ENST00000413137 AFPP02771 609 aaKnown RBP28.1■■■□□ 2.09
RHBDD3-203ENST00000413137 PFKMP08237 780 aa28.1■■■□□ 2.09
RHBDD3-203ENST00000413137 MRE11P49959 708 aa28.1■■■□□ 2.09
RHBDD3-203ENST00000413137 TRIM5Q9C035 493 aa28.1■■■□□ 2.09
RHBDD3-203ENST00000413137 TMEM117Q9H0C3 514 aa28.1■■■□□ 2.09
RHBDD3-203ENST00000413137 ASB7Q9H672 318 aa28.1■■■□□ 2.09
RHBDD3-203ENST00000413137 GIT1Q9Y2X7 761 aa28.1■■■□□ 2.09
RHBDD3-203ENST00000413137 CEP290O15078 2479 aa28.09■■■□□ 2.09
RHBDD3-203ENST00000413137 ANK1P16157 1881 aa28.09■■■□□ 2.09
RHBDD3-203ENST00000413137 EOMESO95936 686 aa28.09■■■□□ 2.09
RHBDD3-203ENST00000413137 FMO5P49326 533 aa28.09■■■□□ 2.09
RHBDD3-203ENST00000413137 TFAMQ00059 246 aaKnown RBP28.09■■■□□ 2.09
RHBDD3-203ENST00000413137 ENPEPQ07075 957 aa28.09■■■□□ 2.09
RHBDD3-203ENST00000413137 CLLU1OSQ5K130 101 aa28.09■■■□□ 2.09
RHBDD3-203ENST00000413137 HACE1Q8IYU2 909 aa28.09■■■□□ 2.09
RHBDD3-203ENST00000413137 PGBD4Q96DM1 585 aa28.09■■■□□ 2.09
RHBDD3-203ENST00000413137 MTMR12Q9C0I1 747 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms