RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 B3GAT3O94766 335 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 EFEMP2O95967 443 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 KRT18P05783 430 aaKnown RBP12.72□□□□□ -0.37
LINC00963-201ENST00000412141 PLS3P13797 630 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 GUCY2CP25092 1073 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 MARCKSP29966 332 aaPredicted RBP12.72□□□□□ -0.37
LINC00963-201ENST00000412141 CLCNKBP51801 687 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 SMTNP53814 917 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 YARSP54577 528 aaKnown RBP12.72□□□□□ -0.37
LINC00963-201ENST00000412141 SLC12A3P55017 1021 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 STRN3Q13033 797 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 CUL4AQ13619 759 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 MCM6Q14566 821 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
LINC00963-201ENST00000412141 NAB2Q15742 525 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 TMEM119Q4V9L6 283 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 ARSHQ5FYA8 562 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 HYIQ5T013 277 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 BRAPQ7Z569 592 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 ST13P5Q8NFI4 369 aaPredicted RBP12.72□□□□□ -0.37
LINC00963-201ENST00000412141 LRRC15Q8TF66 581 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 BICD1Q96G01 975 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 CALML4Q96GE6 196 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 MFSD14AQ96MC6 490 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 TTPALQ9BTX7 342 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 BACH2Q9BYV9 841 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 TMEM134Q9H6X4 195 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 PIDD1Q9HB75 910 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 ARHGAP28Q9P2N2 729 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 RBM19Q9Y4C8 960 aaKnown RBP12.72□□□□□ -0.37
LINC00963-201ENST00000412141 CLIC4Q9Y696 253 aa12.72□□□□□ -0.37
LINC00963-201ENST00000412141 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 ADAM12O43184 909 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 PDGFBP01127 241 aaPredicted RBP12.71□□□□□ -0.37
LINC00963-201ENST00000412141 PLCG1P19174 1290 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 GRM5P41594 1212 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 BRCC3P46736 316 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 PSMD5Q16401 504 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 CCDC149Q6ZUS6 474 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 USP49Q70CQ1 688 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 TMEM130Q8N3G9 435 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 MYCT1Q8N699 235 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 TMEM161BQ8NDZ6 487 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 SMG7Q92540 1137 aaKnown RBP12.71□□□□□ -0.37
LINC00963-201ENST00000412141 C18orf25Q96B23 403 aaPredicted RBP12.71□□□□□ -0.37
LINC00963-201ENST00000412141 AK8Q96MA6 479 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 ACAP3Q96P50 834 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 PPP1R10Q96QC0 940 aaKnown RBP12.71□□□□□ -0.37
LINC00963-201ENST00000412141 PTPRHQ9HD43 1115 aa12.71□□□□□ -0.37
LINC00963-201ENST00000412141 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00963-201ENST00000412141 PIEZO1Q92508 2521 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 TULP1O00294 542 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-201ENST00000412141 FAM13AO94988 1023 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 BRD1O95696 1058 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 MAPTP10636 758 aaKnown RBP12.7□□□□□ -0.38
LINC00963-201ENST00000412141 MCF2P10911 925 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 PDCP20941 246 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 SYT1P21579 422 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 GBP2P32456 591 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-201ENST00000412141 SOX4Q06945 474 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-201ENST00000412141 SPAG1Q07617 926 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 SIGLEC14Q08ET2 396 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 ELMSAN1Q6PJG2 1045 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 MPZL3Q6UWV2 235 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 OTOP3Q7RTS5 596 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 ALYREFQ86V81 257 aaKnown RBP12.7□□□□□ -0.38
LINC00963-201ENST00000412141 SUGP1Q8IWZ8 645 aaKnown RBP12.7□□□□□ -0.38
LINC00963-201ENST00000412141 LNX1Q8TBB1 728 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-201ENST00000412141 SPIRE2Q8WWL2 714 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 ACSF2Q96CM8 615 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-201ENST00000412141 EPSTI1Q96J88 318 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 ZMAT2Q96NC0 199 aaKnown RBP12.7□□□□□ -0.38
LINC00963-201ENST00000412141 CLSTN3Q9BQT9 956 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 TIPINQ9BVW5 301 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 C17orf75Q9HAS0 396 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 TOPORSQ9NS56 1045 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-201ENST00000412141 POLIQ9UNA4 740 aa12.7□□□□□ -0.38
LINC00963-201ENST00000412141 ZMYM2Q9UBW7 1377 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 BMP15O95972 392 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 TKTP29401 623 aaKnown RBP12.69□□□□□ -0.38
LINC00963-201ENST00000412141 OR1D2P34982 312 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 LONP1P36776 959 aaKnown RBP12.69□□□□□ -0.38
LINC00963-201ENST00000412141 RESTQ13127 1097 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
LINC00963-201ENST00000412141 LILRA6Q6PI73 481 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 DCLRE1AQ6PJP8 1040 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 HAUS6Q7Z4H7 955 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 C3orf58Q8NDZ4 430 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
LINC00963-201ENST00000412141 PIK3R5Q8WYR1 880 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 SNX27Q96L92 541 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 CLIC6Q96NY7 704 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 NTPCRQ9BSD7 190 aaKnown RBP12.69□□□□□ -0.38
LINC00963-201ENST00000412141 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 BLOC1S4Q9NUP1 217 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 FNIP2Q9P278 1114 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 LARSQ9P2J5 1176 aaKnown RBP12.69□□□□□ -0.38
LINC00963-201ENST00000412141 DPP7Q9UHL4 492 aa12.69□□□□□ -0.38
LINC00963-201ENST00000412141 SORCS3Q9UPU3 1222 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms