RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 NT5C2P49902 561 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 NTHL1P78549 312 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 SLC35G1Q2M3R5 365 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 COL28A1Q2UY09 1125 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 IFIT1BQ5T764 474 aaKnown RBP7.19□□□□□ -1.26
LINC00396-201ENST00000411690 FAM160B1Q5W0V3 765 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 TAS1R1Q7RTX1 841 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 PROSER1Q86XN7 944 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 KRTAP1-3Q8IUG1 177 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 GLYCTKQ8IVS8 523 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 GLIS3Q8NEA6 775 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 URGCPQ8TCY9 931 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 ZNF668Q96K58 619 aaPredicted RBP7.19□□□□□ -1.26
LINC00396-201ENST00000411690 SCLT1Q96NL6 688 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 BBC3Q96PG8 261 aaPredicted RBP7.19□□□□□ -1.26
LINC00396-201ENST00000411690 FAM193BQ96PV7 902 aaPredicted RBP7.19□□□□□ -1.26
LINC00396-201ENST00000411690 MAP7D2Q96T17 732 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 TMEM175Q9BSA9 504 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 HERC2P3Q9BVR0 1158 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 SMOC1Q9H4F8 434 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 JADE2Q9NQC1 790 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 CHST12Q9NRB3 414 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 ZSWIM5Q9P217 1185 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 MSRB2Q9Y3D2 182 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 GREB1Q4ZG55 1949 aa7.19□□□□□ -1.26
LINC00396-201ENST00000411690 CEP295Q9C0D2 2601 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 ASH1LQ9NR48 2969 aaKnown RBP7.18□□□□□ -1.26
LINC00396-201ENST00000411690 IGKV6D-21A0A0A0MT36 114 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 MEIS3P2A8K0S8 358 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 ZBTB42B2RXF5 422 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 PIK3CDO00329 1044 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 ZNF213O14771 459 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 MAGEB2O15479 319 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 CYTH3O43739 400 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 HYAL3O43820 417 aaPredicted RBP7.18□□□□□ -1.26
LINC00396-201ENST00000411690 B4GALT3O60512 393 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 EPN2O95208 641 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 DARSP14868 501 aaKnown RBP7.18□□□□□ -1.26
LINC00396-201ENST00000411690 TMOD1P28289 359 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 RAP1GAPP47736 663 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 CLCN3P51790 818 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 DSG1Q02413 1049 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 C19orf57Q0VDD7 668 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 MCMDC2Q4G0Z9 681 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 TWF2Q6IBS0 349 aaKnown RBP7.18□□□□□ -1.26
LINC00396-201ENST00000411690 KIAA1211LQ6NV74 962 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 EFCAB12Q6NXP0 572 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 PDXDC2PQ6P474 469 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 LILRA6Q6PI73 481 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 TRMT1LQ7Z2T5 733 aaKnown RBP7.18□□□□□ -1.26
LINC00396-201ENST00000411690 CACNA2D4Q7Z3S7 1137 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 LURAP1LQ8IV03 231 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 CKAP2LQ8IYA6 745 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 TRIM22Q8IYM9 498 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 SPEM1Q8N4L4 309 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 ITFG1Q8TB96 612 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 PI4K2BQ8TCG2 481 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 PIBF1Q8WXW3 757 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 FAM3CQ92520 227 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 DNASE1L2Q92874 299 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 UBAC1Q9BSL1 405 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 EDEM2Q9BV94 578 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 TRAIPQ9BWF2 469 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 PLA2G2FQ9BZM2 168 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 ZNF302Q9NR11 478 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 VPS45Q9NRW7 570 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 KCNH7Q9NS40 1196 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 KANSL3Q9P2N6 904 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 DDX19BQ9UMR2 479 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 POLIQ9UNA4 740 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 PCDHGA5Q9Y5G8 931 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 NFASCO94856 1347 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 EVPLQ92817 2033 aa7.18□□□□□ -1.26
LINC00396-201ENST00000411690 IGF2RP11717 2491 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 K7ESF4 209 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 ECI2O75521 394 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 CSDE1O75534 798 aaKnown RBP7.17□□□□□ -1.26
LINC00396-201ENST00000411690 PAPSS2O95340 614 aaPredicted RBP7.17□□□□□ -1.26
LINC00396-201ENST00000411690 HNRNPA1P09651 372 aaKnown RBP eCLIP7.17□□□□□ -1.26
LINC00396-201ENST00000411690 CHRNB1P11230 501 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 CSRP1P21291 193 aaKnown RBP7.17□□□□□ -1.26
LINC00396-201ENST00000411690 MPLP40238 635 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 PTGIRP43119 386 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 RAB15P59190 212 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 TROAPQ12815 778 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 TCEAL6Q6IPX3 200 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 ABHD15Q6UXT9 468 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 WDR5BQ86VZ2 330 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 CCDC60Q8IWA6 550 aaPredicted RBP7.17□□□□□ -1.26
LINC00396-201ENST00000411690 TCEAL3Q969E4 200 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 GTPBP3Q969Y2 492 aaKnown RBP7.17□□□□□ -1.26
LINC00396-201ENST00000411690 PGBD4Q96DM1 585 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 FAM227BQ96M60 508 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 CHMP4BQ9H444 224 aaKnown RBP7.17□□□□□ -1.26
LINC00396-201ENST00000411690 BRD9Q9H8M2 597 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.17□□□□□ -1.26
LINC00396-201ENST00000411690 FAM105AQ9NUU6 356 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 CACNA2D2Q9NY47 1150 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 KLK13Q9UKR3 277 aa7.17□□□□□ -1.26
LINC00396-201ENST00000411690 CEP131Q9UPN4 1083 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms