RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 TNKSO95271 1327 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 A0A0A6YYJ9 748 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 SLC16A6O15403 523 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TEX33O43247 280 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 POLD1P28340 1107 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MC4RP32245 332 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ETV4P43268 484 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GPR3P46089 330 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GLRBP48167 497 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MTNR1BP49286 362 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 RGS3P49796 1198 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 HSPA2P54652 639 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 LGALS4P56470 323 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MALLQ13021 153 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MOGSQ13724 837 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MYBPC3Q14896 1274 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 BRD3Q15059 726 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 UAP1L1Q3KQV9 507 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CT83Q5H943 113 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 SYCE2Q6PIF2 218 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MAMDC4Q6UXC1 1216 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 BTNL9Q6UXG8 535 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 Q6ZUG5 572 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GAREM2Q75VX8 874 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GPR155Q7Z3F1 870 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 RBM12BQ8IXT5 1001 aaKnown RBP3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CCDC146Q8IYE0 955 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CMTR2Q8IYT2 770 aaKnown RBP3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 THEMISQ8N1K5 641 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GCDHQ92947 438 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ZNF496Q96IT1 587 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TEKT5Q96M29 485 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 WDR92Q96MX6 357 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TACO1Q9BSH4 297 aaKnown RBP3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CARD11Q9BXL7 1154 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CCDC8Q9H0W5 538 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GREM2Q9H772 168 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ZNF277Q9NRM2 450 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 KCND1Q9NSA2 647 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 POLHQ9Y253 713 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CFAP20Q9Y6A4 193 aaKnown RBP3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 BCORL1Q5H9F3 1711 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ABCA9Q8IUA7 1624 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ZMYM4Q5VZL5 1548 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ARHGEF40Q8TER5 1519 aa3.29□□□□□ -1.88
RNU6-1140P-201ENST00000410517 PLA2R1Q13018 1463 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ZNF518AQ6AHZ1 1483 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 A0A0A6YYK5 440 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 PRSS38A1L453 326 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 RASSF10A6NK89 507 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 NDUFS2O75306 463 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 LPLP06858 475 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 NBPF7P0C2Y1 421 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CLEC2LP0C7M8 214 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GYPEP15421 78 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ECHS1P30084 290 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 HIBADHP31937 336 aaKnown RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CACNB3P54284 484 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 PER3P56645 1201 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TBX4P57082 545 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 IL13RA1P78552 427 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 SRSF2Q01130 221 aaKnown RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 KIF23Q02241 960 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 SEC23AQ15436 765 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CCDC157Q569K6 752 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 KRT40Q6A162 431 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 SRGAP1Q7Z6B7 1085 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CATIPQ7Z7H3 387 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CBARPQ8N350 705 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ZNF808Q8N4W9 903 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CAMKK1Q8N5S9 505 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 STPG3Q8N7X2 389 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TGFBRAP1Q8WUH2 860 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 EAF2Q96CJ1 260 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 SLC7A6OSQ96CW6 309 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CYFIP2Q96F07 1278 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 FAM167AQ96KS9 214 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 FAM193BQ96PV7 902 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 OR14A2Q96R54 314 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 UHRF1Q96T88 793 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 PSMD1Q99460 953 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 C7orf25Q9BPX7 421 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CNNM1Q9NRU3 951 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 RBM12Q9NTZ6 932 aaKnown RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 DPP7Q9UHL4 492 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ZNHIT2Q9UHR6 403 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 EDARQ9UNE0 448 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 THRAP3Q9Y2W1 955 aaKnown RBP3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 PAXBP1Q9Y5B6 917 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ABCA8O94911 1581 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TTC37Q6PGP7 1564 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ZFYVE16Q7Z3T8 1539 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ATP10BO94823 1461 aa3.28□□□□□ -1.88
RNU6-1140P-201ENST00000410517 RPTORQ8N122 1335 aa3.27□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CCDC194A0A1B0GVG4 234 aa3.27□□□□□ -1.89
RNU6-1140P-201ENST00000410517 FAM227AF5H4B4 570 aa3.27□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ELL2O00472 640 aaPredicted RBP3.27□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MTSS1O43312 755 aa3.27□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SGTAO43765 313 aa3.27□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SEC24DO94855 1032 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms