RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ANKFY1Q9P2R3 1169 aa15.22■□□□□ 0.03
LIMS2-206ENST00000409754 CDC23Q9UJX2 597 aa15.22■□□□□ 0.03
LIMS2-206ENST00000409754 ANO9A1A5B4 782 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 FOXN3O00409 490 aaPredicted RBP15.21■□□□□ 0.03
LIMS2-206ENST00000409754 CLDN3O15551 220 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 ZC3H11AO75152 810 aaKnown RBP eCLIP15.21■□□□□ 0.03
LIMS2-206ENST00000409754 PNMA6AP0CW24 399 aaPredicted RBP15.21■□□□□ 0.03
LIMS2-206ENST00000409754 ACOT2P49753 483 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 IGBP1P78318 339 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 NKX3-2P78367 333 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 NAB2Q15742 525 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 ARHGAP44Q17R89 818 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
LIMS2-206ENST00000409754 MNS1Q8NEH6 495 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 KLHDC9Q8NEP7 349 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 TAS1R2Q8TE23 839 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 TSC1Q92574 1164 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 NLRP4Q96MN2 994 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 NT5C1BQ96P26 610 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 SYT11Q9BT88 431 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 XPNPEP3Q9NQH7 507 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 NAGPAQ9UK23 515 aa15.21■□□□□ 0.03
LIMS2-206ENST00000409754 BTNL10A8MVZ5 291 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 ABLIM1O14639 778 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 LRRN2O75325 713 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 TMOD1P28289 359 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 MFAP3P55082 362 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 GJA9P57773 515 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 BEX3Q00994 111 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 AMPD2Q01433 879 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 MCL1Q07820 350 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 ZACNQ401N2 412 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 ALKBH5Q6P6C2 394 aaKnown RBP15.21■□□□□ 0.02
LIMS2-206ENST00000409754 TSHZ1Q6ZSZ6 1077 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 TLK2Q86UE8 772 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 BRSK2Q8IWQ3 736 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 SLC30A5Q8TAD4 765 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 FAM81BQ96LP2 452 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 ALS2CR12Q96Q35 445 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 CARD6Q9BX69 1037 aa15.21■□□□□ 0.02
LIMS2-206ENST00000409754 SCN10AQ9Y5Y9 1956 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 CNTNAP2Q9UHC6 1331 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 A6NJR5 290 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 TTLL13PA6NNM8 815 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 DDX3XO00571 662 aaKnown RBP eCLIP15.2■□□□□ 0.02
LIMS2-206ENST00000409754 FAM189A1O60320 539 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 C4BPAP04003 597 aaKnown RBP15.2■□□□□ 0.02
LIMS2-206ENST00000409754 RARBP10826 455 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 COL6A1P12109 1028 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 TNNI1P19237 187 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 PROZP22891 400 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 PHKA2P46019 1235 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 MBTD1Q05BQ5 628 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 NCBP1Q09161 790 aaKnown RBP15.2■□□□□ 0.02
LIMS2-206ENST00000409754 PPFIA1Q13136 1202 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 FAM187BQ17R55 369 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 ZBTB41Q5SVQ8 909 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 PAPD7Q5XG87 772 aaKnown RBP15.2■□□□□ 0.02
LIMS2-206ENST00000409754 MTHFD1LQ6UB35 978 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 ENOSF1Q7L5Y1 443 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 OLIG1Q8TAK6 271 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 HELQQ8TDG4 1101 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 ZNF516Q92618 1163 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 ZBTB10Q96DT7 871 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 NOX5Q96PH1 765 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 CGRRF1Q99675 332 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 TMEM106CQ9BVX2 250 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 PDE11AQ9HCR9 933 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 PRMT7Q9NVM4 692 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-206ENST00000409754 INTUQ9ULD6 942 aa15.2■□□□□ 0.02
LIMS2-206ENST00000409754 EFCAB8A8MWE9 144 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 INO80B-WBP1J3KQ70 363 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 OGTO15294 1046 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 DYNC1LI2O43237 492 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-206ENST00000409754 TADA3O75528 432 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 MOCS3O95396 460 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 WNT7BP56706 349 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 PRPF4BQ13523 1007 aaKnown RBP15.19■□□□□ 0.02
LIMS2-206ENST00000409754 GRIK4Q16099 956 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 WHAMMP3Q1A5X7 153 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 KIAA0753Q2KHM9 967 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 MPZL3Q6UWV2 235 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 TRAPPC11Q7Z392 1133 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 FAM71AQ8IYT1 594 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 PPM1KQ8N3J5 372 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 CEP112Q8N8E3 955 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 LRRN4CLQ8ND94 238 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 LNX1Q8TBB1 728 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-206ENST00000409754 SHC3Q92529 594 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 KREMEN1Q96MU8 473 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 TCHPQ9BT92 498 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 INO80BQ9C086 356 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-206ENST00000409754 IFT122Q9HBG6 1241 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 PTPRHQ9HD43 1115 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 SALL4Q9UJQ4 1053 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 Q9Y3F1 56 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 JRKLQ9Y4A0 524 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 CAPN6Q9Y6Q1 641 aa15.19■□□□□ 0.02
LIMS2-206ENST00000409754 RRN3P2A6NIE6 340 aa15.18■□□□□ 0.02
LIMS2-206ENST00000409754 TULP1O00294 542 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms