RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TMEM161AQ9NX61 479 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 CHD7Q9P2D1 2997 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 A0A0U1RQF3 1178 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 EXTL3O43909 919 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 GNA14O95837 355 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 POU3F3P20264 500 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 IBSPP21815 317 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 IGFBP4P22692 258 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 TPM4P67936 248 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 POU5F1Q01860 360 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 FAM114A1Q8IWE2 563 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 AOPEPQ8N6M6 819 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 C17orf80Q9BSJ5 609 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 MKNK1Q9BUB5 465 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 CCDC94Q9BW85 323 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 SRRTQ9BXP5 876 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 FAM105AQ9NUU6 356 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 MTUS1Q9ULD2 1270 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 NFE2L3Q9Y4A8 694 aa17.98■□□□□ 0.47
TSPAN4-208ENST00000409531 EPOPA6NHQ4 379 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 MAPK13O15264 365 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 SLC16A3O15427 465 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 ZNF623O75123 536 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 EOMESO95936 686 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 EPB41P11171 864 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 GRM5P41594 1212 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 UBXN11Q5T124 520 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 CEP135Q66GS9 1140 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 LRRC55Q6ZSA7 311 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 FILIP1Q7Z7B0 1213 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 ECHDC2Q86YB7 292 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 THNSL1Q8IYQ7 743 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 CMTR2Q8IYT2 770 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 MAFAQ8NHW3 353 aaPredicted RBP17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 SAAL1Q96ER3 474 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 FBXL18Q96ME1 805 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 MED15Q96RN5 788 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 EIF2AQ9BY44 585 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 HAPLN2Q9GZV7 340 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 THAP9Q9H5L6 903 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 CBX8Q9HC52 389 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 PCDHB2Q9Y5E7 798 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 TRIP11Q15643 1979 aa17.97■□□□□ 0.47
TSPAN4-208ENST00000409531 ZNF233A6NK53 670 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 GOLGA6L19H0YKK7 550 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 CLTAP09496 248 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 PSMC2P35998 433 aaKnown RBP17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 IQCB1Q15051 598 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 SNRNP35Q16560 246 aaKnown RBP17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 EPC2Q52LR7 807 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 USP37Q86T82 979 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 TMEM192Q8IY95 271 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 FBXO22Q8NEZ5 403 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 CLP1Q92989 425 aaKnown RBP17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 PGBD4Q96DM1 585 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 ACAP3Q96P50 834 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 FAM213AQ9BRX8 229 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 IPPQ9Y573 584 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 RALGAPA2Q2PPJ7 1873 aa17.96■□□□□ 0.46
TSPAN4-208ENST00000409531 ANK1P16157 1881 aa17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 HOXA2O43364 376 aa17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 FAM189A1O60320 539 aa17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 LPXNO60711 386 aa17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 RB1P06400 928 aa17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 BMPR1AP36894 532 aa17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 YARSP54577 528 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 DHX40Q8IX18 779 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 FAM186BQ8IYM0 893 aa17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 RPF1Q9H9Y2 349 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 METTL14Q9HCE5 456 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 UBN1Q9NPG3 1134 aa17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 TOPORSQ9NS56 1045 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 MAGEC2Q9UBF1 373 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 CPSF3Q9UKF6 684 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 RWDD3Q9Y3V2 267 aa17.95■□□□□ 0.46
TSPAN4-208ENST00000409531 COL4A6Q14031 1691 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 GOLGA8IPA6NC78 632 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 GOLGA8JA6NMD2 632 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 AKAP3O75969 853 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 LINC00271P0C7V0 271 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 ITGA4P13612 1032 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 KRT13P13646 458 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 ACOT2P49753 483 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 GATMP50440 423 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 NCAPHQ15003 741 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 CCDC40Q4G0X9 1142 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 PAN2Q504Q3 1202 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 INTS8Q75QN2 995 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 MRPL10Q7Z7H8 261 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 ZNF598Q86UK7 904 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 CEP120Q8N960 986 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 RDH13Q8NBN7 331 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 SMG8Q8ND04 991 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 EEF2KMTQ96G04 330 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 NXF3Q9H4D5 531 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 FANCLQ9NW38 375 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 RBAKQ9NYW8 714 aaPredicted RBP17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 LMCD1Q9NZU5 365 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 MTCH2Q9Y6C9 303 aa17.94■□□□□ 0.46
TSPAN4-208ENST00000409531 PDCD11Q14690 1871 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms