RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 SNX14Q9Y5W7 946 aa7.77□□□□□ -1.17
SCN9A-202ENST00000409435 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-202ENST00000409435 ADAM9Q13443 819 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 ATF7IP2Q5U623 682 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 CCDC89Q8N998 374 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 RDM1Q8NG50 284 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 BRI3BPQ8WY22 251 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 OSMRQ99650 979 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 MAGEF1Q9HAY2 307 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 BCL2L12Q9HB09 334 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 PPANQ9NQ55 473 aaKnown RBP7.76□□□□□ -1.17
SCN9A-202ENST00000409435 CNGB3Q9NQW8 809 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 GOLGA8IPA6NC78 632 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 GOLGA8JA6NMD2 632 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 SART1O43290 800 aaKnown RBP7.76□□□□□ -1.17
SCN9A-202ENST00000409435 BRD1O95696 1058 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 FGF19O95750 216 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 CASC4Q6P4E1 433 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 CCHCR1Q8TD31 782 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 NFKBIZQ9BYH8 718 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 BCO2Q9BYV7 579 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 MUC3BQ9H195 1237 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 KLK14Q9P0G3 267 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 NRCAMQ92823 1304 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 DNM1LO00429 736 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 ZNF263O14978 683 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 POMCP01189 267 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 WEE1P30291 646 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 NSFP46459 744 aaKnown RBP7.76□□□□□ -1.17
SCN9A-202ENST00000409435 SLFNL1Q499Z3 407 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 BSPRYQ5W0U4 402 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 APOBEC3HQ6NTF7 200 aaKnown RBP7.76□□□□□ -1.17
SCN9A-202ENST00000409435 PPP1R2P3Q6NXS1 205 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 WDR75Q8IWA0 830 aaKnown RBP7.76□□□□□ -1.17
SCN9A-202ENST00000409435 PXMP2Q9NR77 195 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 KRT3P12035 628 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 RASA1P20936 1047 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 PTGER2P43116 358 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 TMED10P49755 219 aaKnown RBP7.76□□□□□ -1.17
SCN9A-202ENST00000409435 AP3M2P53677 418 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 TEAD4Q15561 434 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 CRY2Q49AN0 593 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 FBXW10Q5XX13 1052 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 TMTC3Q6ZXV5 915 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-202ENST00000409435 CCDC42Q96M95 316 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 TIPINQ9BVW5 301 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 RSAD1Q9HA92 442 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 RRAGDQ9NQL2 400 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-202ENST00000409435 MYO1AQ9UBC5 1043 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 GUCA1BQ9UMX6 200 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 CDY2AQ9Y6F7 541 aa7.76□□□□□ -1.17
SCN9A-202ENST00000409435 GSG1L2A8MUP6 293 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 ARVCFO00192 962 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 MCF2LO15068 1137 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 LGR5O75473 907 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 IGHDP01880 384 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 PTGS1P23219 599 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 CACNB1Q02641 598 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 KCNH2Q12809 1159 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 BRD3Q15059 726 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 RABL6Q3YEC7 729 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 GLE1Q53GS7 698 aaKnown RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 C10orf120Q5SQS8 335 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 BADQ92934 168 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 NAPGQ99747 312 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 FAM8A1Q9UBU6 413 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 UBQLN1Q9UMX0 589 aaKnown RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 SUFUQ9UMX1 484 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 SALL1Q9NSC2 1324 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 LOC102724159A0A0B4J2E5 919 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 PAK1Q13153 545 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 KARSQ15046 597 aaKnown RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 PWP2Q15269 919 aaKnown RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 AHCYL2Q96HN2 611 aaKnown RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 ZNF512BQ96KM6 892 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 FAM213AQ9BRX8 229 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 CAPS2Q9BXY5 557 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 CIPCQ9C0C6 399 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 DDX41Q9UJV9 622 aaKnown RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 STAP1Q9ULZ2 295 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 IGSF9BQ9UPX0 1349 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 HGSO14964 777 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 PLEKHA8P1O95397 391 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 GNSP15586 552 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 KCNA5P22460 613 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 DAB2P98082 770 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 CDH18Q13634 790 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 SYCP2LQ5T4T6 812 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 MYSM1Q5VVJ2 828 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 ZNF746Q6NUN9 644 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-202ENST00000409435 TOGARAM2Q6ZUX3 1019 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 BCAS4Q8TDM0 211 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 SLC9A7Q96T83 725 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 YIPF3Q9GZM5 350 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 NKX2-4Q9H2Z4 354 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 CUEDC2Q9H467 287 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 RAB20Q9NX57 234 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 STMN3Q9NZ72 180 aa7.75□□□□□ -1.17
SCN9A-202ENST00000409435 STAP2Q9UGK3 403 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms