RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CPB2Q96IY4 423 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 SARS2Q9NP81 518 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 NDFIP2Q9NV92 336 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PARVAQ9NVD7 372 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PCSK1NQ9UHG2 260 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 BCAP29Q9UHQ4 241 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 NAGPAQ9UK23 515 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PPME1Q9Y570 386 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 REREQ9P2R6 1566 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PDXKO00764 312 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PPP1R12AO14974 1030 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 KLRC1P26715 233 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 SLC11A2P49281 568 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PHEXP78562 749 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 MAP2K5Q13163 448 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PSMD6Q15008 389 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ANKRD40Q6AI12 368 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ANKRD23Q86SG2 305 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 KRT222Q8N1A0 295 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 KCTD17Q8N5Z5 321 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ATP6V0D2Q8N8Y2 350 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 RNF217Q8TC41 542 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 SCG3Q8WXD2 468 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 DEFB118Q96PH6 123 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 SENP7Q9BQF6 1050 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 NT5C1AQ9BXI3 368 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 LRRC4BQ9NT99 713 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 GJB4Q9NTQ9 266 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 AFF4Q9UHB7 1163 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 EFCAB8A8MWE9 144 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 APOL1O14791 398 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 HMGCRP04035 888 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 KRT7P08729 469 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PRKAR2AP13861 404 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TM4SF1P30408 202 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 GUCY1A2P33402 732 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 CLCN3P51790 818 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TRIP13Q15645 432 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ANO4Q32M45 955 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 MMEL1Q495T6 779 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 GJC2Q5T442 439 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 HEATR6Q6AI08 1181 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 GPR142Q7Z601 462 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 FRMD5Q7Z6J6 570 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 C7orf61Q8IZ16 206 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 AFAP1L1Q8TED9 768 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 DNAJB3Q8WWF6 145 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 REEP2Q9BRK0 252 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 NUP85Q9BW27 656 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ALDH8A1Q9H2A2 487 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 SAMSN1Q9NSI8 373 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TRPM5Q9NZQ8 1165 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 DIS3Q9Y2L1 958 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 MROH2AA6NES4 1674 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TMEM247A6NEH6 219 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PGRMC1O00264 195 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PRPF4O43172 522 aaKnown RBP eCLIP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 CA12O43570 354 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ZMYND10O75800 440 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 THP07101 528 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 FAM200BP0CF97 657 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 CTNNB1P35222 781 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 RGS7P49802 495 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 DPCR1Q3MIW9 517 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TAF1BQ53T94 588 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 MEI1Q5TIA1 1274 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ANKRD20A3Q5VUR7 823 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TAF2Q6P1X5 1199 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TRIM48Q8IWZ4 208 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 CCDC170Q8IYT3 715 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ARHGAP24Q8N264 748 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ATPAF2Q8N5M1 289 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 MCUR1Q96AQ8 359 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TRIM54Q9BYV2 358 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 CATSPERBQ9H7T0 1116 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 MID2Q9UJV3 735 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 DAAM1Q9Y4D1 1078 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PXDNQ92626 1479 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 H3BRB1 525 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ZNF445P59923 1031 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 BEX3Q00994 111 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 SNRNP35Q16560 246 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 THEMIS2Q5TEJ8 643 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ANKS3Q6ZW76 656 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 RASSF3Q86WH2 238 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ENGASEQ8NFI3 743 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 CD99L2Q8TCZ2 262 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 IGDCC4Q8TDY8 1250 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 HPDLQ96IR7 371 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TAF1DQ9H5J8 278 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TUT1Q9H6E5 874 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TRIM49BA6NDI0 452 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 EEF2KO00418 725 aaKnown RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TRIM49P0CI25 452 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TRIM49CP0CI26 452 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 CTCFP49711 727 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ATP11AP98196 1134 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PGM5Q15124 567 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 CATSPERGQ6ZRH7 1159 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PCGF5Q86SE9 256 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms