RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 RPAINQ86UA6 219 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 VPS36Q86VN1 386 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 NT5DC4Q86YG4 428 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 WDR49Q8IV35 697 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 CD302Q8IX05 232 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 C7orf31Q8N865 590 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 PCSK9Q8NBP7 692 aaKnown RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 SLAIN1Q8ND83 568 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 KLHDC9Q8NEP7 349 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 PLEKHO2Q8TD55 490 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 LMBR1Q8WVP7 490 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 DHX38Q92620 1227 aaKnown RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 TSPAN18Q96SJ8 248 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 CHP1Q99653 195 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 CGRRF1Q99675 332 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 FDXACB1Q9BRP7 624 aaPredicted RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 TCHPQ9BT92 498 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 SEZ6LQ9BYH1 1024 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 ADAMTS10Q9H324 1103 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 NLRC4Q9NPP4 1024 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 SETD4Q9NVD3 440 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 RAB20Q9NX57 234 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 TRMT1Q9NXH9 659 aaKnown RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 RBAKQ9NYW8 714 aaPredicted RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 CPSF3Q9UKF6 684 aaKnown RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 ZMYND8Q9ULU4 1186 aaPredicted RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 SPTBN5Q9NRC6 3674 aaKnown RBP10.59□□□□□ -0.71
POLR1A-202ENST00000409024 FAM189A1O60320 539 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 B4GALT4O60513 344 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 C4BPAP04003 597 aaKnown RBP10.59□□□□□ -0.71
POLR1A-202ENST00000409024 CLTAP09496 248 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 C6orf222P0C671 652 aaPredicted RBP10.59□□□□□ -0.71
POLR1A-202ENST00000409024 CYP2C9P11712 490 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 SOX5P35711 763 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 GCLMP48507 274 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 NLRP11P59045 1033 aaKnown RBP10.59□□□□□ -0.71
POLR1A-202ENST00000409024 ETF1P62495 437 aaKnown RBP10.59□□□□□ -0.71
POLR1A-202ENST00000409024 KLHL30Q0D2K2 578 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 DCAF4L1Q3SXM0 396 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 HGSNATQ68CP4 663 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 IQCEQ6IPM2 695 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 TOGARAM2Q6ZUX3 1019 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 SV2AQ7L0J3 742 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 RSPH3Q86UC2 560 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 C7orf61Q8IZ16 206 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 C17orf53Q8N3J3 647 aaPredicted RBP10.59□□□□□ -0.71
POLR1A-202ENST00000409024 KIF18AQ8NI77 898 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 NLRP7Q8WX94 980 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 CCDC127Q96BQ5 260 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 PAWRQ96IZ0 340 aaKnown RBP10.59□□□□□ -0.71
POLR1A-202ENST00000409024 DEFB118Q96PH6 123 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 ADPGKQ9BRR6 497 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 TSEN34Q9BSV6 310 aaKnown RBP10.59□□□□□ -0.71
POLR1A-202ENST00000409024 UBE2OQ9C0C9 1292 aaKnown RBP10.59□□□□□ -0.71
POLR1A-202ENST00000409024 HAPLN2Q9GZV7 340 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 DEF6Q9H4E7 631 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 ASB7Q9H672 318 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 ARHGAP20Q9P2F6 1191 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 ANKFY1Q9P2R3 1169 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 DNAJC12Q9UKB3 198 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 FHOD1Q9Y613 1164 aa10.59□□□□□ -0.71
POLR1A-202ENST00000409024 A0A1B0GUA9 196 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 KRT86O43790 486 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 AKR1B10O60218 316 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 ADAMTS4O75173 837 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 GPR32O75388 356 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 ERLIN2O94905 339 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 VTNP04004 478 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 ACTN1P12814 892 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 TNNI1P19237 187 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 MAGEA10P43363 369 aaPredicted RBP10.58□□□□□ -0.72
POLR1A-202ENST00000409024 ACOT2P49753 483 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 CRYBB1P53674 252 aaPredicted RBP10.58□□□□□ -0.72
POLR1A-202ENST00000409024 GCNT1Q02742 428 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 TUBB2AQ13885 445 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 RAPGEF1Q13905 1077 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 BMS1Q14692 1282 aaKnown RBP10.58□□□□□ -0.72
POLR1A-202ENST00000409024 MTF1Q14872 753 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 DRAP1Q14919 205 aaPredicted RBP10.58□□□□□ -0.72
POLR1A-202ENST00000409024 SLC18A3Q16572 532 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 DUOXA2Q1HG44 320 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 TMEM132AQ24JP5 1023 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 ZNF568Q3ZCX4 644 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 WDR44Q5JSH3 913 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 IRF2BP2Q7Z5L9 587 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 RNF180Q86T96 592 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 ZBTB45Q96K62 511 aaPredicted RBP10.58□□□□□ -0.72
POLR1A-202ENST00000409024 GUCD1Q96NT3 240 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 NT5C1BQ96P26 610 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 TUBB2BQ9BVA1 445 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 FAM124BQ9H5Z6 455 aaPredicted RBP10.58□□□□□ -0.72
POLR1A-202ENST00000409024 RPF1Q9H9Y2 349 aaKnown RBP10.58□□□□□ -0.72
POLR1A-202ENST00000409024 XPNPEP3Q9NQH7 507 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 DDX20Q9UHI6 824 aaKnown RBP10.58□□□□□ -0.72
POLR1A-202ENST00000409024 GTF2IRD1Q9UHL9 959 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 INTUQ9ULD6 942 aa10.58□□□□□ -0.72
POLR1A-202ENST00000409024 MOXD2PA6NHM9 499 aa10.57□□□□□ -0.72
POLR1A-202ENST00000409024 USP27XA6NNY8 438 aa10.57□□□□□ -0.72
POLR1A-202ENST00000409024 F8VZ95 297 aa10.57□□□□□ -0.72
POLR1A-202ENST00000409024 PJA2O43164 708 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms