RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 DRC1Q96MC2 740 aa24.72■■□□□ 1.55
KDELR3-202ENST00000409006 PPP1R10Q96QC0 940 aaKnown RBP24.72■■□□□ 1.55
KDELR3-202ENST00000409006 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.72■■□□□ 1.55
KDELR3-202ENST00000409006 ABLIM1O14639 778 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 SLC16A4O15374 487 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 GUCY2CP25092 1073 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 HOXD11P31277 338 aaPredicted RBP24.71■■□□□ 1.55
KDELR3-202ENST00000409006 SLC12A3P55017 1021 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 VCPP55072 806 aaKnown RBP24.71■■□□□ 1.55
KDELR3-202ENST00000409006 OSTNP61366 133 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 MTMR3Q13615 1198 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 ARL6IP4Q66PJ3 421 aaKnown RBP24.71■■□□□ 1.55
KDELR3-202ENST00000409006 CD300LGQ6UXG3 332 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 CEP57Q86XR8 500 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 PLCD3Q8N3E9 789 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 SYT2Q8N9I0 419 aaPredicted RBP24.71■■□□□ 1.55
KDELR3-202ENST00000409006 LNX1Q8TBB1 728 aaPredicted RBP24.71■■□□□ 1.55
KDELR3-202ENST00000409006 LRRC15Q8TF66 581 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 ZNF707Q96C28 371 aaPredicted RBP24.71■■□□□ 1.55
KDELR3-202ENST00000409006 GOLGA2P5Q9HBQ8 144 aa24.71■■□□□ 1.55
KDELR3-202ENST00000409006 NPHP3-ACAD11A0A0J9YXS1 232 aa24.7■■□□□ 1.54
KDELR3-202ENST00000409006 N4BP1O75113 896 aaKnown RBP24.7■■□□□ 1.54
KDELR3-202ENST00000409006 ZNF568Q3ZCX4 644 aa24.7■■□□□ 1.54
KDELR3-202ENST00000409006 TMEM119Q4V9L6 283 aa24.7■■□□□ 1.54
KDELR3-202ENST00000409006 ZBTB45Q96K62 511 aaPredicted RBP24.7■■□□□ 1.54
KDELR3-202ENST00000409006 CLSTN3Q9BQT9 956 aa24.7■■□□□ 1.54
KDELR3-202ENST00000409006 NTPCRQ9BSD7 190 aaKnown RBP24.7■■□□□ 1.54
KDELR3-202ENST00000409006 TTPALQ9BTX7 342 aa24.7■■□□□ 1.54
KDELR3-202ENST00000409006 MRPL4Q9BYD3 311 aaKnown RBP24.7■■□□□ 1.54
KDELR3-202ENST00000409006 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.7■■□□□ 1.54
KDELR3-202ENST00000409006 MEFVO15553 781 aaPredicted RBP24.69■■□□□ 1.54
KDELR3-202ENST00000409006 ADAM12O43184 909 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 PAPLNO95428 1278 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 PLA2G4BP0C869 781 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 PROZP22891 400 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 GRM5P41594 1212 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 CLCNKBP51801 687 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 CACNB1Q02641 598 aaPredicted RBP24.69■■□□□ 1.54
KDELR3-202ENST00000409006 GRIN1Q05586 938 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 SOX4Q06945 474 aaPredicted RBP24.69■■□□□ 1.54
KDELR3-202ENST00000409006 ARSHQ5FYA8 562 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 ALKAL1Q6UXT8 129 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 OTOP3Q7RTS5 596 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 SUGP1Q8IWZ8 645 aaKnown RBP24.69■■□□□ 1.54
KDELR3-202ENST00000409006 PRSS33Q8NF86 280 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 HDAC7Q8WUI4 952 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 PIK3R5Q8WYR1 880 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 NT5C3AQ9H0P0 336 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 KCNH6Q9H252 994 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 C17orf75Q9HAS0 396 aa24.69■■□□□ 1.54
KDELR3-202ENST00000409006 WDR6Q9NNW5 1121 aaKnown RBP24.69■■□□□ 1.54
KDELR3-202ENST00000409006 RBM19Q9Y4C8 960 aaKnown RBP24.69■■□□□ 1.54
KDELR3-202ENST00000409006 SMIM28A0A1B0GU29 152 aa24.68■■□□□ 1.54
KDELR3-202ENST00000409006 NHLH1Q02575 133 aa24.68■■□□□ 1.54
KDELR3-202ENST00000409006 PSMD5Q16401 504 aa24.68■■□□□ 1.54
KDELR3-202ENST00000409006 XKR4Q5GH76 650 aa24.68■■□□□ 1.54
KDELR3-202ENST00000409006 UBALD2Q8IYN6 164 aa24.68■■□□□ 1.54
KDELR3-202ENST00000409006 C3orf58Q8NDZ4 430 aa24.68■■□□□ 1.54
KDELR3-202ENST00000409006 SMG7Q92540 1137 aaKnown RBP24.68■■□□□ 1.54
KDELR3-202ENST00000409006 ACSF2Q96CM8 615 aaPredicted RBP24.68■■□□□ 1.54
KDELR3-202ENST00000409006 ZMAT2Q96NC0 199 aaKnown RBP24.68■■□□□ 1.54
KDELR3-202ENST00000409006 TIPINQ9BVW5 301 aa24.68■■□□□ 1.54
KDELR3-202ENST00000409006 RHOBTB2Q9BYZ6 727 aa24.68■■□□□ 1.54
KDELR3-202ENST00000409006 PLEKHA4Q9H4M7 779 aa24.68■■□□□ 1.54
KDELR3-202ENST00000409006 DPP7Q9UHL4 492 aa24.68■■□□□ 1.54
KDELR3-202ENST00000409006 C1RP00736 705 aa24.67■■□□□ 1.54
KDELR3-202ENST00000409006 PLS3P13797 630 aa24.67■■□□□ 1.54
KDELR3-202ENST00000409006 UPP1Q16831 310 aa24.67■■□□□ 1.54
KDELR3-202ENST00000409006 APBB1IPQ7Z5R6 666 aaPredicted RBP24.67■■□□□ 1.54
KDELR3-202ENST00000409006 TMEM161BQ8NDZ6 487 aa24.67■■□□□ 1.54
KDELR3-202ENST00000409006 SPIRE2Q8WWL2 714 aa24.67■■□□□ 1.54
KDELR3-202ENST00000409006 CDK5RAP3Q96JB5 506 aa24.67■■□□□ 1.54
KDELR3-202ENST00000409006 CCDC94Q9BW85 323 aaPredicted RBP24.67■■□□□ 1.54
KDELR3-202ENST00000409006 CLUHO75153 1309 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 NOTCH4Q99466 2003 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 TMEM189-UBE2V1I3L0A0 370 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 I3L4J1 428 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 B3GAT3O94766 335 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 HARSP12081 509 aaKnown RBP24.66■■□□□ 1.54
KDELR3-202ENST00000409006 CREMQ03060 361 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 CUL4AQ13619 759 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 SEZ6Q53EL9 994 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 DCLRE1AQ6PJP8 1040 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 MPZL3Q6UWV2 235 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 KCTD17Q8N5Z5 321 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 TCHPQ9BT92 498 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 FBXW11Q9UKB1 542 aa24.66■■□□□ 1.54
KDELR3-202ENST00000409006 MAPTP10636 758 aaKnown RBP24.65■■□□□ 1.54
KDELR3-202ENST00000409006 MCF2P10911 925 aa24.65■■□□□ 1.54
KDELR3-202ENST00000409006 FGFR3P22607 806 aa24.65■■□□□ 1.54
KDELR3-202ENST00000409006 AVPR2P30518 371 aa24.65■■□□□ 1.54
KDELR3-202ENST00000409006 BRCC3P46736 316 aa24.65■■□□□ 1.54
KDELR3-202ENST00000409006 YARSP54577 528 aaKnown RBP24.65■■□□□ 1.54
KDELR3-202ENST00000409006 ELAVL2Q12926 359 aaKnown RBP24.65■■□□□ 1.54
KDELR3-202ENST00000409006 ELMSAN1Q6PJG2 1045 aa24.65■■□□□ 1.54
KDELR3-202ENST00000409006 RSPO2Q6UXX9 243 aaPredicted RBP24.65■■□□□ 1.54
KDELR3-202ENST00000409006 CYP26C1Q6V0L0 522 aa24.65■■□□□ 1.54
KDELR3-202ENST00000409006 SNX27Q96L92 541 aa24.65■■□□□ 1.54
KDELR3-202ENST00000409006 AK8Q96MA6 479 aa24.65■■□□□ 1.54
KDELR3-202ENST00000409006 MYADMQ96S97 322 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms