RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NT5DC1Q5TFE4 455 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 LIN9Q5TKA1 542 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 EEF1DP3Q658K8 133 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 DCLRE1AQ6PJP8 1040 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 TMC5Q6UXY8 1006 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 RTL10Q7L3V2 364 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 BMP8AQ7Z5Y6 402 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 ZDHHC14Q8IZN3 488 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 DAW1Q8N136 415 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 RIN2Q8WYP3 895 aaPredicted RBP9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 PIK3R5Q8WYR1 880 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 KCNN1Q92952 543 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 ACAP3Q96P50 834 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 PNMA5Q96PV4 448 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 BACH2Q9BYV9 841 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 CDT1Q9H211 546 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 ZSCAN16Q9H4T2 348 aaPredicted RBP9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 POMKQ9H5K3 350 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 PARVGQ9HBI0 331 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 C11orf16Q9NQ32 467 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 MIOSQ9NXC5 875 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 SORCS3Q9UPU3 1222 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 CLDN3O15551 220 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 KIF4AO95239 1232 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 PROZP22891 400 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 RPL9P32969 192 aaKnown RBP9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 PLA2G5P39877 138 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 ZXDAP98168 799 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 PSMD5Q16401 504 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 FAM171A1Q5VUB5 890 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 ANKS3Q6ZW76 656 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 KCNK18Q7Z418 384 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 GPBP1Q86WP2 473 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 KRI1Q8N9T8 703 aaKnown RBP9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 TMEM161BQ8NDZ6 487 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 LARP4BQ92615 738 aaKnown RBP9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 RAD54LQ92698 747 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 PPP1R10Q96QC0 940 aaKnown RBP9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 TSPAN18Q96SJ8 248 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 TARS2Q9BW92 718 aaKnown RBP9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 GPR62Q9BZJ7 368 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 CCSER1Q9C0I3 900 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 PIDD1Q9HB75 910 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 PTPRHQ9HD43 1115 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 ANKFY1Q9P2R3 1169 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 STK17AQ9UEE5 414 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 MORC2Q9Y6X9 1032 aaPredicted RBP9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 MYH11P35749 1972 aa9.94□□□□□ -0.82
SNORD88A-201ENST00000408314 SMIM28A0A1B0GU29 152 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 TMEM221A6NGB7 291 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 TTLL13PA6NNM8 815 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 C2CD4DB7Z1M9 353 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 K7ENM7 598 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 M0R296 226 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 HNRNPDLO14979 420 aaKnown RBP9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 XYLBO75191 536 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 B3GAT3O94766 335 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 EDN1P05305 212 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 HSP90AA1P07900 732 aaKnown RBP9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 CLTAP09496 248 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 HNRNPA1P09651 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 MAPTP10636 758 aaKnown RBP9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 HARSP12081 509 aaKnown RBP9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 KCNE1P15382 129 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 PLCG1P19174 1290 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 SYT1P21579 422 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 LIG4P49917 911 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 NCKAP1LP55160 1127 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 RAD51AP2Q09MP3 1159 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 XKR4Q5GH76 650 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 CEP57Q86XR8 500 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 HSCBQ8IWL3 235 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 MYCT1Q8N699 235 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 C12orf76Q8N812 135 aaPredicted RBP9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 SMG7Q92540 1137 aaKnown RBP9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 NXPE3Q969Y0 559 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 SNX27Q96L92 541 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 PLIN2Q99541 437 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 REEP2Q9BRK0 252 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 PLEKHA5Q9HAU0 1116 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 CNTN3Q9P232 1028 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 NUB1Q9Y5A7 615 aa9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 ZFP37Q9Y6Q3 630 aaPredicted RBP9.93□□□□□ -0.82
SNORD88A-201ENST00000408314 DENND4AQ7Z401 1863 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 CLUHO75153 1309 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 CCDC195A0A1B0GUA6 201 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 ARHGEF37A1IGU5 675 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 SFI1A8K8P3 1242 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 H7C4K7 107 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 SYN3O14994 580 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 TGM5O43548 720 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 TRAK2O60296 914 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 ZMYND10O75800 440 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 PAPLNO95428 1278 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 PIGRP01833 764 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 POU2F2P09086 479 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 FGFR3P22607 806 aa9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 SP100P23497 879 aaPredicted RBP9.92□□□□□ -0.82
SNORD88A-201ENST00000408314 PAX3P23760 479 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms