RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PROZP22891 400 aa21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 UBA7P41226 1012 aa21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 GRM5P41594 1212 aa21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 FAM171A1Q5VUB5 890 aa21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 APBB1IPQ7Z5R6 666 aaPredicted RBP21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 TMEM161BQ8NDZ6 487 aa21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 SPIRE2Q8WWL2 714 aa21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 ZBTB45Q96K62 511 aaPredicted RBP21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 FNIP2Q9P278 1114 aa21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 DOCK6Q96HP0 2047 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 TGM5O43548 720 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 PLA2G5P39877 138 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 CEP57Q86XR8 500 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 GPR65Q8IYL9 337 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 TDRD5Q8NAT2 981 aaKnown RBP21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 TCHPQ9BT92 498 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 TTPALQ9BTX7 342 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 GOLGA2P5Q9HBQ8 144 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 KCND2Q9NZV8 630 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 ARIH1Q9Y4X5 557 aaPredicted RBP21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 SMIM28A0A1B0GU29 152 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 CCDC195A0A1B0GUA6 201 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 BMP15O95972 392 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 ASGR2P07307 311 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 MAPTP10636 758 aaKnown RBP21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 CLCNKBP51801 687 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 SIGLEC14Q08ET2 396 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 DHX8Q14562 1220 aaKnown RBP21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 ALKAL1Q6UXT8 129 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 C15orf39Q6ZRI6 1047 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 KREMEN2Q8NCW0 462 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 FAM122AQ96E09 287 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 CALML4Q96GE6 196 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 CCDC94Q9BW85 323 aaPredicted RBP21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 BLOC1S4Q9NUP1 217 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 LIMD1Q9UGP4 676 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 CLIC4Q9Y696 253 aa21.15■□□□□ 0.98
SMARCB1-204ENST00000407422 HARSP12081 509 aaKnown RBP21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 PDCP20941 246 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 LONP1P36776 959 aaKnown RBP21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 SMTNP53814 917 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 SOX4Q06945 474 aaPredicted RBP21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 KARSQ15046 597 aaKnown RBP21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 XKR4Q5GH76 650 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 FAM173BQ6P4H8 233 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 LILRA6Q6PI73 481 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 MPZL3Q6UWV2 235 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 CD300LGQ6UXG3 332 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 CMASQ8NFW8 434 aaPredicted RBP21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 LNX1Q8TBB1 728 aaPredicted RBP21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 PBXIP1Q96AQ6 731 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 ASIC4Q96FT7 647 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 ZMAT2Q96NC0 199 aaKnown RBP21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 SMOC2Q9H3U7 446 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 DAXXQ9UER7 740 aaPredicted RBP21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 USTQ9Y2C2 406 aa21.14■□□□□ 0.97
SMARCB1-204ENST00000407422 MEFVO15553 781 aaPredicted RBP21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 B3GAT3O94766 335 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 BRD1O95696 1058 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 MCF2P10911 925 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 PLCG1P19174 1290 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 SYT1P21579 422 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 YARSP54577 528 aaKnown RBP21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 STRN3Q13033 797 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 CCDC149Q6ZUS6 474 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 BMP8AQ7Z5Y6 402 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 GPBP1Q86WP2 473 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 ZDHHC14Q8IZN3 488 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 PIK3R5Q8WYR1 880 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 MFSD14AQ96MC6 490 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 CLSTN3Q9BQT9 956 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 REEP2Q9BRK0 252 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 TOPORSQ9NS56 1045 aaPredicted RBP21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 FOXD4L1Q9NU39 408 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 ANKFY1Q9P2R3 1169 aa21.13■□□□□ 0.97
SMARCB1-204ENST00000407422 PDCD11Q14690 1871 aaKnown RBP21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 SLC26A4O43511 780 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 RESTQ13127 1097 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 MCM6Q14566 821 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 PTPAQ15257 358 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 PSMD5Q16401 504 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 UPP1Q16831 310 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 SEZ6Q53EL9 994 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 DCLRE1AQ6PJP8 1040 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 USP49Q70CQ1 688 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 C3orf58Q8NDZ4 430 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 ZNF707Q96C28 371 aaPredicted RBP21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 SNX27Q96L92 541 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 ACAP3Q96P50 834 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 PLEKHA4Q9H4M7 779 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 DPP7Q9UHL4 492 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 DOCK8Q8NF50 2099 aa21.12■□□□□ 0.97
SMARCB1-204ENST00000407422 ADAM12O43184 909 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 TOM1L1O75674 476 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 CREMQ03060 361 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 SPECC1Q5M775 1068 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 ELMSAN1Q6PJG2 1045 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 HDAC7Q8WUI4 952 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 EPSTI1Q96J88 318 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms