RNA–Protein interactions for RNA: ENST00000406848.1

GAPDHP42-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 42, humanhuman

BASIC

Gene GAPDHP42, Length 981 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP42-201ENST00000406848 PHLPP2Q6ZVD8 1323 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 TRIOBPQ9H2D6 2365 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 hCG_2014768A0A024R1R8 64 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 IGKV6-21A0A0C4DH24 114 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 KRBA1A5PL33 1030 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 MAFO75444 373 aaPredicted RBP6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 ITGB2P05107 769 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 CPB1P15086 417 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 SCP2P22307 547 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 PTGS1P23219 599 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 ITGB8P26012 769 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 MCM7P33993 719 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 TXKP42681 527 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 KCNJ6P48051 423 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 CRYBB1P53674 252 aaPredicted RBP6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 CCL23P55773 120 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 IGBP1P78318 339 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 MRPS6P82932 125 aaKnown RBP6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 ATP2C1P98194 919 aaPredicted RBP6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 GUCY1B3Q02153 619 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 PRKCEQ02156 737 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 SPIRE1Q08AE8 756 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 MXD4Q14582 209 aaPredicted RBP6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 SHHQ15465 462 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 PLEKHG4Q58EX7 1191 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 EARS2Q5JPH6 523 aaKnown RBP6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 ZNF618Q5T7W0 954 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 PSAPL1Q6NUJ1 521 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 NXPE4Q6UWF7 544 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 TSHZ1Q6ZSZ6 1077 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 HFE2Q6ZVN8 426 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 ZNF365Q70YC5 407 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 ZNF410Q86VK4 478 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 IGSF22Q8N9C0 903 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 SLC7A3Q8WY07 619 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 TIPINQ9BVW5 301 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 PLVAPQ9BX97 442 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 CELF4Q9BZC1 486 aaKnown RBP6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 BRINP2Q9C0B6 783 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 NPHS2Q9NP85 383 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 C11orf16Q9NQ32 467 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 CYP26B1Q9NR63 512 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 GJB4Q9NTQ9 266 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 KBTBD4Q9NVX7 518 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 DBR1Q9UK59 544 aaKnown RBP6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 ATP6V1DQ9Y5K8 247 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 TRPV2Q9Y5S1 764 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 SLC4A7Q9Y6M7 1214 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 LTBP2Q14767 1821 aa6.29□□□□□ -1.4
GAPDHP42-201ENST00000406848 ENPP3O14638 875 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 CHMP2AO43633 222 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 STX6O43752 255 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 ZNF862O60290 1169 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 SLITRK3O94933 977 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 CLSTN1O94985 981 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 C22orf31O95567 290 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 AMHP03971 560 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 SSBP05455 408 aaKnown RBP eCLIP6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 STAG3L1P0CL83 205 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 SYT1P21579 422 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 MARK3P27448 753 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 YWHABP31946 246 aaKnown RBP6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 ABCD1P33897 745 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 LONP1P36776 959 aaKnown RBP6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 PLAURQ03405 335 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 MGAT3Q09327 533 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 ZNF174Q15697 407 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 KRT79Q5XKE5 535 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 NCAPH2Q6IBW4 605 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 PDE12Q6L8Q7 609 aaKnown RBP6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 EFCAB12Q6NXP0 572 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 C16orf59Q7L2K0 433 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 FAM35AQ86V20 835 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 KIAA0319LQ8IZA0 1049 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 LINC01465Q8N7H1 131 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 C4orf32Q8N8J7 132 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 MCPH1Q8NEM0 835 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 CEP170P1Q96L14 293 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 CCDC43Q96MW1 224 aaKnown RBP6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 ZNF396Q96N95 335 aaPredicted RBP6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 EIF2AK1Q9BQI3 630 aaKnown RBP6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 LXNQ9BS40 222 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 SPON2Q9BUD6 331 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 BCO2Q9BYV7 579 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 DHX33Q9H6R0 707 aaKnown RBP6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 CHST12Q9NRB3 414 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 C1orf112Q9NSG2 853 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 KCND2Q9NZV8 630 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 LRWD1Q9UFC0 647 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 MSRAQ9UJ68 235 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 PCDHA11Q9Y5I1 949 aa6.28□□□□□ -1.4
GAPDHP42-201ENST00000406848 TRIP12Q14669 1992 aaPredicted RBP6.27□□□□□ -1.4
GAPDHP42-201ENST00000406848 BRCA2P51587 3418 aa6.27□□□□□ -1.41
GAPDHP42-201ENST00000406848 FAM229AH3BQW9 127 aa6.27□□□□□ -1.41
GAPDHP42-201ENST00000406848 J3QW42 95 aa6.27□□□□□ -1.41
GAPDHP42-201ENST00000406848 TNRC18O15417 2968 aaPredicted RBP6.27□□□□□ -1.41
GAPDHP42-201ENST00000406848 NBNO60934 754 aa6.27□□□□□ -1.41
GAPDHP42-201ENST00000406848 STBD1O95210 358 aa6.27□□□□□ -1.41
GAPDHP42-201ENST00000406848 CHRNA1P02708 482 aa6.27□□□□□ -1.41
GAPDHP42-201ENST00000406848 NID1P14543 1247 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms