RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 RAB27AP51159 221 aa23.85■■□□□ 1.41
EPCAM-202ENST00000405271 DSC3Q14574 896 aa23.85■■□□□ 1.41
EPCAM-202ENST00000405271 NR1I3Q14994 352 aa23.85■■□□□ 1.41
EPCAM-202ENST00000405271 SEZ6Q53EL9 994 aa23.85■■□□□ 1.41
EPCAM-202ENST00000405271 FKBP15Q5T1M5 1219 aa23.85■■□□□ 1.41
EPCAM-202ENST00000405271 APBB2Q92870 758 aa23.85■■□□□ 1.41
EPCAM-202ENST00000405271 FTHL17Q9BXU8 183 aa23.85■■□□□ 1.41
EPCAM-202ENST00000405271 WNT8AQ9H1J5 351 aa23.85■■□□□ 1.41
EPCAM-202ENST00000405271 PES1O00541 588 aaKnown RBP23.84■■□□□ 1.41
EPCAM-202ENST00000405271 NBNO60934 754 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 IL18RAPO95256 599 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 RFC2P35250 354 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 KCNH2Q12809 1159 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 PPIGQ13427 754 aaKnown RBP eCLIP23.84■■□□□ 1.41
EPCAM-202ENST00000405271 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.84■■□□□ 1.41
EPCAM-202ENST00000405271 ACAP3Q96P50 834 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 FNBP1Q96RU3 617 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 TMX1Q9H3N1 280 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 FAM105AQ9NUU6 356 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 INTS13Q9NVM9 706 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 N4BP1O75113 896 aaKnown RBP23.84■■□□□ 1.41
EPCAM-202ENST00000405271 CDC25BP30305 580 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 CCL23P55773 120 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 OSTNP61366 133 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 ENOX2Q16206 610 aaKnown RBP23.84■■□□□ 1.41
EPCAM-202ENST00000405271 PLEKHG4Q58EX7 1191 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 HACE1Q8IYU2 909 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 PLEKHO2Q8TD55 490 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 TTC3P53804 2025 aa23.84■■□□□ 1.41
EPCAM-202ENST00000405271 CXCL10P02778 98 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 TRIM49P0CI25 452 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 TRIM49CP0CI26 452 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 CXCL8P10145 99 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 SKIP12755 728 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 CLDN10P78369 228 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 UBXN1Q04323 297 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 SEPT8Q92599 483 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 CCDC127Q96BQ5 260 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 CGRRF1Q99675 332 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 NXF3Q9H4D5 531 aaKnown RBP23.83■■□□□ 1.41
EPCAM-202ENST00000405271 IPPQ9Y573 584 aa23.83■■□□□ 1.41
EPCAM-202ENST00000405271 FNDC1Q4ZHG4 1894 aaPredicted RBP23.82■■□□□ 1.4
EPCAM-202ENST00000405271 LRRIQ3A6PVS8 624 aaPredicted RBP23.82■■□□□ 1.4
EPCAM-202ENST00000405271 GTF2H1P32780 548 aa23.82■■□□□ 1.4
EPCAM-202ENST00000405271 YARSP54577 528 aaKnown RBP23.82■■□□□ 1.4
EPCAM-202ENST00000405271 DLG4P78352 724 aa23.82■■□□□ 1.4
EPCAM-202ENST00000405271 GPNMBQ14956 572 aa23.82■■□□□ 1.4
EPCAM-202ENST00000405271 CD302Q8IX05 232 aa23.82■■□□□ 1.4
EPCAM-202ENST00000405271 TMEM192Q8IY95 271 aa23.82■■□□□ 1.4
EPCAM-202ENST00000405271 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.82■■□□□ 1.46e-9■■□□□ 13.1
EPCAM-202ENST00000405271 ASB7Q9H672 318 aa23.82■■□□□ 1.4
EPCAM-202ENST00000405271 PDE11AQ9HCR9 933 aa23.82■■□□□ 1.4
EPCAM-202ENST00000405271 TOPORSQ9NS56 1045 aaPredicted RBP23.82■■□□□ 1.4
EPCAM-202ENST00000405271 PCDHB2Q9Y5E7 798 aa23.82■■□□□ 1.4
EPCAM-202ENST00000405271 A0A1W2PQC6 194 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 GTPBP10A4D1E9 387 aaKnown RBP23.81■■□□□ 1.4
EPCAM-202ENST00000405271 TEX33O43247 280 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 MGEA5O60502 916 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 ACRP10323 421 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 DLATP10515 647 aaKnown RBP23.81■■□□□ 1.4
EPCAM-202ENST00000405271 FMO5P49326 533 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 AP3M2P53677 418 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 TMEM240Q5SV17 173 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 C1orf220Q5T0J3 134 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 WDR49Q8IV35 697 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 SMG8Q8ND04 991 aaKnown RBP23.81■■□□□ 1.4
EPCAM-202ENST00000405271 SCLYQ96I15 445 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 RNPC3Q96LT9 517 aaKnown RBP23.81■■□□□ 1.4
EPCAM-202ENST00000405271 ERGIC2Q96RQ1 377 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 ADAM2Q99965 735 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 PLEKHA5Q9HAU0 1116 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 C1orf112Q9NSG2 853 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 SNTG2Q9NY99 539 aa23.81■■□□□ 1.4
EPCAM-202ENST00000405271 TTC26A0AVF1 554 aa23.8■■□□□ 1.4
EPCAM-202ENST00000405271 PMM2O15305 246 aa23.8■■□□□ 1.4
EPCAM-202ENST00000405271 P4HA2O15460 535 aa23.8■■□□□ 1.4
EPCAM-202ENST00000405271 ZNF623O75123 536 aa23.8■■□□□ 1.4
EPCAM-202ENST00000405271 MYL7Q01449 175 aa23.8■■□□□ 1.4
EPCAM-202ENST00000405271 GPR153Q6NV75 609 aa23.8■■□□□ 1.4
EPCAM-202ENST00000405271 IL23AQ9NPF7 189 aa23.8■■□□□ 1.4
EPCAM-202ENST00000405271 RGS18Q9NS28 235 aa23.8■■□□□ 1.4
EPCAM-202ENST00000405271 PTPRSQ13332 1948 aa23.8■■□□□ 1.4
EPCAM-202ENST00000405271 ITIH6Q6UXX5 1313 aa23.8■■□□□ 1.4
EPCAM-202ENST00000405271 RECQL4O94761 1208 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 TNNI1P19237 187 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 PBX1P40424 430 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 MXI1P50539 228 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 WNT7BP56706 349 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 PPP3CAQ08209 521 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 SLC10A6Q3KNW5 377 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 ZNF365Q70YC5 407 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 NT5DC4Q86YG4 428 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 VSTM4Q8IW00 320 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 VWCEQ96DN2 955 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 SNX27Q96L92 541 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 TMEM8AQ9HCN3 771 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 A0A0U1RQF3 1178 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 CETN1Q12798 172 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 MRPL10Q7Z7H8 261 aaKnown RBP23.79■■□□□ 1.4
EPCAM-202ENST00000405271 DBF4BQ8NFT6 615 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms