RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TSG101Q99816 390 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 KIAA1586Q9HCI6 787 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 TBC1D13Q9NVG8 400 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 MIOSQ9NXC5 875 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 MSRAQ9UJ68 235 aa31.94■■■□□ 2.7
USP42-202ENST00000404008 TTC26A0AVF1 554 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 TRIM49BA6NDI0 452 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 PTGESO14684 152 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 POMCP01189 267 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 CA3P07451 260 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 ADRB2P07550 413 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 SCNN1GP51170 649 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 PAK1Q13153 545 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 LRRC55Q6ZSA7 311 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 NOC3LQ8WTT2 800 aaKnown RBP31.93■■■□□ 2.7
USP42-202ENST00000404008 PLEKHA5Q9HAU0 1116 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 CNTN3Q9P232 1028 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 KANSL3Q9P2N6 904 aa31.93■■■□□ 2.7
USP42-202ENST00000404008 LETM1O95202 739 aaPredicted RBP31.92■■■□□ 2.7
USP42-202ENST00000404008 NR2F2P24468 414 aa31.92■■■□□ 2.7
USP42-202ENST00000404008 CBWD2Q8IUF1 395 aa31.92■■■□□ 2.7
USP42-202ENST00000404008 PLAGL2Q9UPG8 496 aa31.92■■■□□ 2.7
USP42-202ENST00000404008 CHD7Q9P2D1 2997 aa31.91■■■□□ 2.7
USP42-202ENST00000404008 EXOC3O60645 756 aa31.91■■■□□ 2.7
USP42-202ENST00000404008 DNAJB2P25686 324 aa31.91■■■□□ 2.7
USP42-202ENST00000404008 RPL13P26373 211 aaKnown RBP31.91■■■□□ 2.7
USP42-202ENST00000404008 PPP2R3AQ06190 1150 aa31.91■■■□□ 2.7
USP42-202ENST00000404008 HSP90AA2PQ14568 343 aaPredicted RBP31.91■■■□□ 2.7
USP42-202ENST00000404008 SNRNP35Q16560 246 aaKnown RBP31.91■■■□□ 2.7
USP42-202ENST00000404008 FOXR2Q6PJQ5 311 aa31.91■■■□□ 2.7
USP42-202ENST00000404008 BRSK2Q8IWQ3 736 aa31.91■■■□□ 2.7
USP42-202ENST00000404008 FIBCD1Q8N539 461 aa31.91■■■□□ 2.7
USP42-202ENST00000404008 RBAKQ9NYW8 714 aaPredicted RBP31.91■■■□□ 2.7
USP42-202ENST00000404008 HCSTQ9UBK5 93 aa31.91■■■□□ 2.7
USP42-202ENST00000404008 DACH1Q9UI36 760 aa31.91■■■□□ 2.7
USP42-202ENST00000404008 MRPL42Q9Y6G3 142 aaKnown RBP31.91■■■□□ 2.7
USP42-202ENST00000404008 LINC01553A4QN01 128 aa31.9■■■□□ 2.7
USP42-202ENST00000404008 ZNF233A6NK53 670 aa31.9■■■□□ 2.7
USP42-202ENST00000404008 LACTBL1A8MY62 500 aa31.9■■■□□ 2.7
USP42-202ENST00000404008 KCNE1P15382 129 aa31.9■■■□□ 2.7
USP42-202ENST00000404008 GRIK3Q13003 919 aa31.9■■■□□ 2.7
USP42-202ENST00000404008 TTI2Q6NXR4 508 aa31.9■■■□□ 2.7
USP42-202ENST00000404008 CWH43Q9H720 699 aa31.9■■■□□ 2.7
USP42-202ENST00000404008 SMIM28A0A1B0GU29 152 aa31.89■■■□□ 2.7
USP42-202ENST00000404008 BICDL2A1A5D9 508 aa31.89■■■□□ 2.7
USP42-202ENST00000404008 ARHGEF15O94989 841 aa31.89■■■□□ 2.7
USP42-202ENST00000404008 RNASELQ05823 741 aaKnown RBP31.89■■■□□ 2.7
USP42-202ENST00000404008 ADAM9Q13443 819 aa31.89■■■□□ 2.7
USP42-202ENST00000404008 STX1AQ16623 288 aa31.89■■■□□ 2.7
USP42-202ENST00000404008 GLRA4Q5JXX5 417 aa31.89■■■□□ 2.7
USP42-202ENST00000404008 CD302Q8IX05 232 aa31.89■■■□□ 2.7
USP42-202ENST00000404008 ZC3H3Q8IXZ2 948 aaKnown RBP31.89■■■□□ 2.7
USP42-202ENST00000404008 RDH13Q8NBN7 331 aa31.89■■■□□ 2.7
USP42-202ENST00000404008 ZMAT2Q96NC0 199 aaKnown RBP31.89■■■□□ 2.7
USP42-202ENST00000404008 NKX2-4Q9H2Z4 354 aa31.89■■■□□ 2.7
USP42-202ENST00000404008 RWDD2AQ9UIY3 292 aa31.89■■■□□ 2.7
USP42-202ENST00000404008 IL18RAPO95256 599 aa31.88■■■□□ 2.69
USP42-202ENST00000404008 THP07101 528 aa31.88■■■□□ 2.69
USP42-202ENST00000404008 LINC00271P0C7V0 271 aa31.88■■■□□ 2.69
USP42-202ENST00000404008 STX17P56962 302 aa31.88■■■□□ 2.69
USP42-202ENST00000404008 NAB2Q15742 525 aa31.88■■■□□ 2.69
USP42-202ENST00000404008 CLP1Q92989 425 aaKnown RBP31.88■■■□□ 2.69
USP42-202ENST00000404008 FAM212AQ96EL1 285 aa31.88■■■□□ 2.69
USP42-202ENST00000404008 PPP1R10Q96QC0 940 aaKnown RBP31.88■■■□□ 2.69
USP42-202ENST00000404008 DUSP9Q99956 384 aaKnown RBP31.88■■■□□ 2.69
USP42-202ENST00000404008 ANO10Q9NW15 660 aa31.88■■■□□ 2.69
USP42-202ENST00000404008 CASP4P49662 377 aa31.87■■■□□ 2.69
USP42-202ENST00000404008 WNT7BP56706 349 aa31.87■■■□□ 2.69
USP42-202ENST00000404008 FKBP3Q00688 224 aaKnown RBP31.87■■■□□ 2.69
USP42-202ENST00000404008 TYRO3Q06418 890 aa31.87■■■□□ 2.69
USP42-202ENST00000404008 ZNF280BQ86YH2 543 aa31.87■■■□□ 2.69
USP42-202ENST00000404008 MED15Q96RN5 788 aa31.87■■■□□ 2.69
USP42-202ENST00000404008 ASB7Q9H672 318 aa31.87■■■□□ 2.69
USP42-202ENST00000404008 FRMD4BQ9Y2L6 1034 aa31.87■■■□□ 2.69
USP42-202ENST00000404008 SYCE3A1L190 88 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 B4GALT3O60512 393 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 DDHD2O94830 711 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 TAP1Q03518 808 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 DSC1Q08554 894 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 ZSCAN23Q3MJ62 389 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 CT47A1Q5JQC4 288 aaPredicted RBP31.86■■■□□ 2.69
USP42-202ENST00000404008 CEP135Q66GS9 1140 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 TIFAQ96CG3 184 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 EEF2KMTQ96G04 330 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 TSPAN18Q96SJ8 248 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 NRDE2Q9H7Z3 1164 aa31.86■■■□□ 2.69
USP42-202ENST00000404008 SOX1O00570 391 aaPredicted RBP31.85■■■□□ 2.69
USP42-202ENST00000404008 CETN3O15182 167 aa31.85■■■□□ 2.69
USP42-202ENST00000404008 AKAP3O75969 853 aa31.85■■■□□ 2.69
USP42-202ENST00000404008 ERCC5P28715 1186 aaPredicted RBP31.85■■■□□ 2.69
USP42-202ENST00000404008 SPAG1Q07617 926 aa31.85■■■□□ 2.69
USP42-202ENST00000404008 CYP24A1Q07973 514 aa31.85■■■□□ 2.69
USP42-202ENST00000404008 MFSD14AQ96MC6 490 aa31.85■■■□□ 2.69
USP42-202ENST00000404008 MAPK13O15264 365 aa31.84■■■□□ 2.69
USP42-202ENST00000404008 PPP2R2DQ66LE6 453 aa31.84■■■□□ 2.69
USP42-202ENST00000404008 JADE1Q6IE81 842 aa31.84■■■□□ 2.69
USP42-202ENST00000404008 FAM193BQ96PV7 902 aaPredicted RBP31.84■■■□□ 2.69
USP42-202ENST00000404008 SLC28A3Q9HAS3 691 aa31.84■■■□□ 2.69
USP42-202ENST00000404008 PDE11AQ9HCR9 933 aa31.84■■■□□ 2.69
USP42-202ENST00000404008 DNAJB4Q9UDY4 337 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms