RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 SLC16A4O15374 487 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 TGM5O43548 720 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 RFPL2O75678 378 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 BRD1O95696 1058 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 PROZP22891 400 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 GRM5P41594 1212 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 CUL4AQ13619 759 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 GLYCTKQ8IVS8 523 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 ZDHHC14Q8IZN3 488 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 KCTD17Q8N5Z5 321 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 SYT2Q8N9I0 419 aaPredicted RBP16.87■□□□□ 0.29
TPM1-207ENST00000403994 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 AK8Q96MA6 479 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 TTPALQ9BTX7 342 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 TARS2Q9BW92 718 aaKnown RBP16.87■□□□□ 0.29
TPM1-207ENST00000403994 KCND2Q9NZV8 630 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 DPP7Q9UHL4 492 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
TPM1-207ENST00000403994 MYH15Q9Y2K3 1946 aa16.87■□□□□ 0.29
TPM1-207ENST00000403994 CACNA1HO95180 2353 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 VPS37CA5D8V6 355 aaPredicted RBP16.86■□□□□ 0.29
TPM1-207ENST00000403994 SFI1A8K8P3 1242 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 TMEM189-UBE2V1I3L0A0 370 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 PAPLNO95428 1278 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 C1RP00736 705 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 ASGR2P07307 311 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 PLA2G4BP0C869 781 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 SPATA31D3P0C874 917 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 MYBP10242 640 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 PLS3P13797 630 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 PSMD5Q16401 504 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 FAM171A1Q5VUB5 890 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 SPATA31D4Q6ZUB0 917 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 PALB2Q86YC2 1186 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 TMEM161BQ8NDZ6 487 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 LRRC15Q8TF66 581 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 SPIRE2Q8WWL2 714 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 PIK3R5Q8WYR1 880 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 ZNF707Q96C28 371 aaPredicted RBP16.86■□□□□ 0.29
TPM1-207ENST00000403994 SNX27Q96L92 541 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 RHOBTB2Q9BYZ6 727 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 SMOC2Q9H3U7 446 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 GOLGA2P5Q9HBQ8 144 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 TOPORSQ9NS56 1045 aaPredicted RBP16.86■□□□□ 0.29
TPM1-207ENST00000403994 CLUHO75153 1309 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 USP34Q70CQ2 3546 aa16.86■□□□□ 0.29
TPM1-207ENST00000403994 CCDC195A0A1B0GUA6 201 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 SLC26A4O43511 780 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 BMP15O95972 392 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 MAPTP10636 758 aaKnown RBP16.85■□□□□ 0.29
TPM1-207ENST00000403994 MCF2P10911 925 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 YARSP54577 528 aaKnown RBP16.85■□□□□ 0.29
TPM1-207ENST00000403994 OSTNP61366 133 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 CACNB1Q02641 598 aaPredicted RBP16.85■□□□□ 0.29
TPM1-207ENST00000403994 SOX4Q06945 474 aaPredicted RBP16.85■□□□□ 0.29
TPM1-207ENST00000403994 ELAVL2Q12926 359 aaKnown RBP16.85■□□□□ 0.29
TPM1-207ENST00000403994 MPZL3Q6UWV2 235 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 OTOP3Q7RTS5 596 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 SUGP1Q8IWZ8 645 aaKnown RBP16.85■□□□□ 0.29
TPM1-207ENST00000403994 UBALD2Q8IYN6 164 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 PLCD3Q8N3E9 789 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 FBXL6Q8N531 539 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 C3orf58Q8NDZ4 430 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 HDAC7Q8WUI4 952 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 NTPCRQ9BSD7 190 aaKnown RBP16.85■□□□□ 0.29
TPM1-207ENST00000403994 CCDC94Q9BW85 323 aaPredicted RBP16.85■□□□□ 0.29
TPM1-207ENST00000403994 KCNH6Q9H252 994 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 PLEKHA4Q9H4M7 779 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 ANKFY1Q9P2R3 1169 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 FBXW11Q9UKB1 542 aa16.85■□□□□ 0.29
TPM1-207ENST00000403994 DOCK6Q96HP0 2047 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 NPHP3-ACAD11A0A0J9YXS1 232 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 SMIM28A0A1B0GU29 152 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 N4BP1O75113 896 aaKnown RBP16.84■□□□□ 0.29
TPM1-207ENST00000403994 HARSP12081 509 aaKnown RBP16.84■□□□□ 0.29
TPM1-207ENST00000403994 IGFBP6P24592 240 aaPredicted RBP16.84■□□□□ 0.29
TPM1-207ENST00000403994 CLCNKBP51801 687 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 GRIN1Q05586 938 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 NOLC1Q14978 699 aaKnown RBP eCLIP16.84■□□□□ 0.29
TPM1-207ENST00000403994 ARSHQ5FYA8 562 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 XKR4Q5GH76 650 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 LILRA6Q6PI73 481 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 ALKAL1Q6UXT8 129 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 CYP26C1Q6V0L0 522 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.84■□□□□ 0.29
TPM1-207ENST00000403994 CEP57Q86XR8 500 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 LNX1Q8TBB1 728 aaPredicted RBP16.84■□□□□ 0.29
TPM1-207ENST00000403994 SMG7Q92540 1137 aaKnown RBP16.84■□□□□ 0.29
TPM1-207ENST00000403994 ACSF2Q96CM8 615 aaPredicted RBP16.84■□□□□ 0.29
TPM1-207ENST00000403994 UROC1Q96N76 676 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 CLSTN3Q9BQT9 956 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 REEP2Q9BRK0 252 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 WDR6Q9NNW5 1121 aaKnown RBP16.84■□□□□ 0.29
TPM1-207ENST00000403994 ZDHHC7Q9NXF8 308 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 LIMD1Q9UGP4 676 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 MYO15AQ9UKN7 3530 aa16.84■□□□□ 0.29
TPM1-207ENST00000403994 WDR87Q6ZQQ6 2873 aa16.83■□□□□ 0.29
TPM1-207ENST00000403994 MEFVO15553 781 aaPredicted RBP16.83■□□□□ 0.28
TPM1-207ENST00000403994 TOM1L1O75674 476 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 B3GAT3O94766 335 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms