RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 C4orf19Q8IY42 314 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 GPR161Q8N6U8 529 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CCDC148Q8NFR7 591 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SLC7A14Q8TBB6 771 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CCDC51Q96ER9 411 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 DYDC2Q96IM9 177 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TTPALQ9BTX7 342 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PHF20Q9BVI0 1012 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SH3GLB2Q9NR46 395 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 USP20Q9Y2K6 914 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PKD1L2Q7Z442 2459 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 DMXL2Q8TDJ6 3036 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 NBEAQ8NFP9 2946 aa13.24□□□□□ -0.29
SPTLC1P3-201ENST00000403408 A0A087WWV3 80 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 INO80B-WBP1J3KQ70 363 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ASAP2O43150 1006 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TBC1D4O60343 1298 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TADA2AO75478 443 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 EDN1P05305 212 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CEBPBP17676 345 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 GLRA2P23416 452 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 HOXA9P31269 272 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ARL2P36404 184 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 GRIK3Q13003 919 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PSMD5Q16401 504 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 EARS2Q5JPH6 523 aaKnown RBP13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PPM1JQ5JR12 505 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 WDR44Q5JSH3 913 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 AXDND1Q5T1B0 1012 aaPredicted RBP13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 FAM171A1Q5VUB5 890 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 BLIDQ8IZY5 108 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 FBXL16Q8N461 479 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 MCRS1Q96EZ8 462 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 BORCS6Q96GS4 357 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 JAKMIP1Q96N16 626 aaKnown RBP13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 POLIQ9UNA4 740 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SNX14Q9Y5W7 946 aa13.23□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SF3B1O75533 1304 aaKnown RBP eCLIP13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TICRRQ7Z2Z1 1910 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 A0A1B0GUA9 196 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SLC30A4O14863 429 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ECI2O75521 394 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 POU2F2P09086 479 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SDHBP21912 280 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 MAGEA9P43362 315 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 EVCP57679 992 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CYP4A11Q02928 519 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SRSF5Q13243 272 aaKnown RBP13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RAB33AQ14088 237 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 EPHA7Q15375 998 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 XKR9Q5GH70 373 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CEP57Q86XR8 500 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 DAGLBQ8NCG7 672 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TCEAL4Q96EI5 215 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 MTRQ99707 1265 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 C2orf42Q9NWW7 574 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PARP2Q9UGN5 583 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 KCNJ14Q9UNX9 436 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PPME1Q9Y570 386 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SPAG17Q6Q759 2223 aa13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SMG1Q96Q15 3661 aaKnown RBP13.22□□□□□ -0.29
SPTLC1P3-201ENST00000403408 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 HRO43593 1189 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 NR1I2O75469 434 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 SLITRK3O94933 977 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RHOP08100 348 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 RPS6KB1P23443 525 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 OR1D2P34982 312 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CCR2P41597 374 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 FGD1P98174 961 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PFKPQ01813 784 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 AKAP17AQ02040 695 aaKnown RBP13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 POU5F1BQ06416 359 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 ADCY1Q08828 1119 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TUSC3Q13454 348 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TOB2Q14106 344 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 GRM2Q14416 872 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 KRT32Q14532 448 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 PABPC1LQ4VXU2 614 aaKnown RBP13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 TCP11Q8WWU5 503 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 CHRDQ9H2X0 955 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 KCNH3Q9ULD8 1083 aa13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 NDRG2Q9UN36 371 aaKnown RBP13.21□□□□□ -0.29
SPTLC1P3-201ENST00000403408 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 HMGB1P09429 215 aaKnown RBP13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 FGFR3P22607 806 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 SATB1Q01826 763 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 CREMQ03060 361 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 PCBP1Q15365 356 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 PRSS36Q5K4E3 855 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 SLC27A1Q6PCB7 646 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 ZNF852Q6ZMS4 543 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 FAM20AQ96MK3 541 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 ZSWIM3Q96MP5 696 aa13.2□□□□□ -0.3
SPTLC1P3-201ENST00000403408 GPRC5CQ9NQ84 441 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms