RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 SNF8Q96H20 258 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 OSBPL1AQ9BXW6 950 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 NPHS2Q9NP85 383 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 FBXO28Q9NVF7 368 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 NKX1-2Q9UD57 310 aaPredicted RBP9.78□□□□□ -0.84
HPS4-203ENST00000402105 ZMYM2Q9UBW7 1377 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 ROBO1Q9Y6N7 1651 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 NCANO14594 1321 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 IPO5O00410 1097 aaKnown RBP9.78□□□□□ -0.84
HPS4-203ENST00000402105 ENTPD5O75356 428 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 TTC4O95801 387 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 FOSP01100 380 aaPredicted RBP9.78□□□□□ -0.84
HPS4-203ENST00000402105 IL1R1P14778 569 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 RRM1P23921 792 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 CTNNA2P26232 953 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 EPHB2P29323 1055 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 ATP13A4Q4VNC1 1196 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 LRRC8CQ8TDW0 803 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 EPS8L1Q8TE68 723 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 RBM15Q96T37 977 aaKnown RBP eCLIP9.78□□□□□ -0.842e-6■■■■□ 23.7
HPS4-203ENST00000402105 NINJ2Q9NZG7 142 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 ADAM22Q9P0K1 906 aa9.78□□□□□ -0.84
HPS4-203ENST00000402105 CNOT7Q9UIV1 285 aaKnown RBP9.78□□□□□ -0.84
HPS4-203ENST00000402105 LGR5O75473 907 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 GSTA1P08263 222 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 PLS3P13797 630 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 HSPA6P17066 643 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 CCND1P24385 295 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 FOXN2P32314 431 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 GBP1P32455 592 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 SREBF1P36956 1147 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 PEX5P50542 639 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 MFAP3P55082 362 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 STRN3Q13033 797 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 MUM1Q2TAK8 710 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 ZNF394Q53GI3 561 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 CROCCP2Q86T23 111 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 TTC8Q8TAM2 541 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 ACER1Q8TDN7 264 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 TAS1R2Q8TE23 839 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 SEMA4DQ92854 862 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 HSD17B14Q9BPX1 270 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 HERPUD2Q9BSE4 406 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 OLFML3Q9NRN5 406 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 PCYOX1Q9UHG3 505 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 PAPPAQ13219 1627 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 GTPBP10A4D1E9 387 aaKnown RBP9.77□□□□□ -0.85
HPS4-203ENST00000402105 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
HPS4-203ENST00000402105 CYP11B1P15538 503 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 MXRA7P84157 204 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 XKR9Q5GH70 373 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 THEMIS2Q5TEJ8 643 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 TRMT10CQ7L0Y3 403 aaKnown RBP9.77□□□□□ -0.85
HPS4-203ENST00000402105 HAUS6Q7Z4H7 955 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 APBB1IPQ7Z5R6 666 aaPredicted RBP9.77□□□□□ -0.85
HPS4-203ENST00000402105 POMGNT1Q8WZA1 660 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 BORCS6Q96GS4 357 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 FAXDC2Q96IV6 333 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 CSRNP1Q96S65 589 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 TEKT3Q9BXF9 490 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 PI4KBQ9UBF8 816 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 PHTF1Q9UMS5 762 aa9.77□□□□□ -0.85
HPS4-203ENST00000402105 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.77□□□□□ -0.85
HPS4-203ENST00000402105 CFAP69A5D8W1 941 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 SMIM24O75264 130 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 CYP3A4P08684 503 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 TNNI1P19237 187 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 HSPA1LP34931 641 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 BNIP1Q12981 228 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 ZBED8Q8IZ13 594 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 SCYL3Q8IZE3 742 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 CCDC17Q96LX7 622 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 KREMEN1Q96MU8 473 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 RXFP1Q9HBX9 757 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 UBN1Q9NPG3 1134 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 SUGT1Q9Y2Z0 365 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 EME2A4GXA9 379 aaPredicted RBP9.76□□□□□ -0.85
HPS4-203ENST00000402105 ALDH3A1P30838 453 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 JAG1P78504 1218 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 SARNPP82979 210 aaKnown RBP9.76□□□□□ -0.85
HPS4-203ENST00000402105 BIRC2Q13490 618 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 PKN2Q16513 984 aaKnown RBP9.76□□□□□ -0.85
HPS4-203ENST00000402105 Q4G0T1 1027 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 MDH1BQ5I0G3 518 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 SPOPLQ6IQ16 392 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 APOBEC3HQ6NTF7 200 aaKnown RBP9.76□□□□□ -0.85
HPS4-203ENST00000402105 TLDC1Q6P9B6 456 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 ANKRD35Q8N283 1001 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 CKAP2Q8WWK9 683 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 KIFAP3Q92845 792 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 NT5C1BQ96P26 610 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 SMC6Q96SB8 1091 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 POLR3CQ9BUI4 534 aaPredicted RBP9.76□□□□□ -0.85
HPS4-203ENST00000402105 WDR11Q9BZH6 1224 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 AAASQ9NRG9 546 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 PCDHA3Q9Y5H8 950 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 CYP3A7-CYP3A51PA0A087WV96 503 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 IGKV6D-41A0A0C4DH26 115 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 CLGNO14967 610 aa9.76□□□□□ -0.85
HPS4-203ENST00000402105 CYP3A7P24462 503 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms