RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 GRIN2DO15399 1336 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 DDX3XO00571 662 aaKnown RBP eCLIP17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 TRIM66O15016 1216 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ADAMTS4O75173 837 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 SOX5P35711 763 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 SLC26A2P50443 739 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ZNF131P52739 623 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 KCNA1Q09470 495 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 EMC10Q5UCC4 262 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FAM160B1Q5W0V3 765 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 HS2ST1Q7LGA3 356 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PIGOQ8TEQ8 1089 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PIK3R5Q8WYR1 880 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ARMC5Q96C12 935 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 NACC1Q96RE7 527 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 C16orf70Q9BSU1 422 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 STK33Q9BYT3 514 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 UNC93B1Q9H1C4 597 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 SMARCAD1Q9H4L7 1026 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 WDR81Q562E7 1941 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ZNF233A6NK53 670 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 BHMG1C9JSJ3 638 aaPredicted RBP17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ZNF862O60290 1169 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PGK1P00558 417 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 LGALS2P05162 132 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 C6orf222P0C671 652 aaPredicted RBP17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 MAGEA9P43362 315 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 GUCY2FP51841 1108 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 RASGEF1CQ8N431 466 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 METTL13Q8N6R0 699 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ODF2LQ9ULJ1 636 aa17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 NOC2LQ9Y3T9 749 aaKnown RBP17.17■□□□□ 0.34
CHRFAM7A-203ENST00000401522 NCANO14594 1321 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 F8VZ95 297 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 STBD1O95210 358 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CCDC172P0C7W6 258 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CCL5P13501 91 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ATP4AP20648 1035 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CST5P28325 142 aaPredicted RBP17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 NMT1P30419 496 aaKnown RBP17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FMO5P49326 533 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 MTFR1Q15390 333 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 GNASQ5JWF2 1037 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 LRIG3Q6UXM1 1119 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 KDM7AQ6ZMT4 941 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 KLHDC9Q8NEP7 349 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 SLC30A5Q8TAD4 765 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 GLG1Q92896 1179 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ZNF333Q96JL9 665 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PLEKHA4Q9H4M7 779 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 DMAC2Q9NW81 257 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FRMD4BQ9Y2L6 1034 aa17.16■□□□□ 0.34
CHRFAM7A-203ENST00000401522 MYADML2A6NDP7 307 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 SFI1A8K8P3 1242 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 TMCO5BA8MYB1 307 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 EVI5O60447 810 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 KPNA6O60684 536 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 BEX3Q00994 111 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 GJB7Q6PEY0 223 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ZNF720Q7Z2F6 126 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 SLITRK6Q9H5Y7 841 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ERAP1Q9NZ08 941 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 HMGB1P1B2RPK0 211 aaPredicted RBP17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 KRT14P02533 472 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 TMEM253P0C7T8 217 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 YWHABP31946 246 aaKnown RBP17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 XKR3Q5GH77 459 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CCSAPQ6IQ19 270 aaPredicted RBP17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 NT5DC3Q86UY8 548 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 TRIM50Q86XT4 487 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FAM178BQ8IXR5 827 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 LRRC45Q96CN5 670 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 RNF208Q9H0X6 261 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 GOLPH3Q9H4A6 298 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 TMEM51Q9NW97 253 aa17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 TTC7AQ9ULT0 858 aaPredicted RBP17.15■□□□□ 0.34
CHRFAM7A-203ENST00000401522 MYH9P35579 1960 aaKnown RBP17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 H3BRB1 525 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 KRIT1O00522 736 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 EBAG9O00559 213 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ZBTB39O15060 712 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ZEB2O60315 1214 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 RFX1P22670 979 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 GALCP54803 685 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 PRKCEQ02156 737 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 MYBPC2Q14324 1141 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 HLTFQ14527 1009 aaKnown RBP eCLIP17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ZC2HC1CQ53FD0 456 aaPredicted RBP17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ANO5Q75V66 913 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 DAAM2Q86T65 1068 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 RNF180Q86T96 592 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 SLC9A9Q8IVB4 645 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 OLIG1Q8TAK6 271 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 LNX1Q8TBB1 728 aaPredicted RBP17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 BCAS4Q8TDM0 211 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 RFFLQ8WZ73 363 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 HES6Q96HZ4 224 aa17.14■□□□□ 0.33
CHRFAM7A-203ENST00000401522 FIZ1Q96SL8 496 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms