RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 DDNO94850 711 aaPredicted RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 SLC25A27O95847 323 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 FGGP02679 453 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 CTNNA2P26232 953 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 IREB2P48200 963 aaKnown RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 PTENP60484 403 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 SP4Q02446 784 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 DHX34Q14147 1143 aaKnown RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 SEL1L2Q5TEA6 688 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 ACAD10Q6JQN1 1059 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 KCNV1Q6PIU1 500 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 PSPC1Q8WXF1 523 aaKnown RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 SEC14L1Q92503 715 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 KAT5Q92993 513 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 TSPAN18Q96SJ8 248 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 AP1M1Q9BXS5 423 aa11.55□□□□□ -0.56
LINC00649-202ENST00000400353 ADARB2Q9NS39 739 aaKnown RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 AGO2Q9UKV8 859 aaKnown RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 UTP11Q9Y3A2 253 aaKnown RBP11.55□□□□□ -0.56
LINC00649-202ENST00000400353 SIP14410 1827 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 GAS2O43903 313 aaKnown RBP11.54□□□□□ -0.56
LINC00649-202ENST00000400353 MYBL1P10243 752 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 DLATP10515 647 aaKnown RBP11.54□□□□□ -0.56
LINC00649-202ENST00000400353 SOX10P56693 466 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 ERVK-9P63128 1117 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 HLTFQ14527 1009 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC00649-202ENST00000400353 IQCKQ8N0W5 287 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 DCPSQ96C86 337 aaKnown RBP11.54□□□□□ -0.56
LINC00649-202ENST00000400353 ZNF653Q96CK0 615 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 ZIM3Q96PE6 472 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 ZSWIM1Q9BR11 485 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 DDX47Q9H0S4 455 aaKnown RBP11.54□□□□□ -0.56
LINC00649-202ENST00000400353 RASAL2Q9UJF2 1139 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 FZD1Q9UP38 647 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 PAPPA2Q9BXP8 1791 aa11.54□□□□□ -0.56
LINC00649-202ENST00000400353 ESYT3A0FGR9 886 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 K7ERI5 159 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 MMEP08473 750 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 ATP4AP20648 1035 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 GLRA2P23416 452 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 GBP1P32455 592 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 GTF2A1P52655 376 aaPredicted RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 AP3M2P53677 418 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 SP2Q02086 613 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 CLEC16AQ2KHT3 1053 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 ZACNQ401N2 412 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 SPDYCQ5MJ68 293 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 TRIM72Q6ZMU5 477 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 SEPT14Q6ZU15 432 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 SLC47A2Q86VL8 602 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 ZNF564Q8TBZ8 553 aaPredicted RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 FAM210AQ96ND0 272 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 POP1Q99575 1024 aaKnown RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 HINFPQ9BQA5 517 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 PLVAPQ9BX97 442 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 SPATC1LQ9H0A9 340 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 TOPORSQ9NS56 1045 aaPredicted RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 A0A0G2JLL6 359 aaPredicted RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 ZSCAN5CA6NGD5 496 aaPredicted RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 LRRIQ4A6NIV6 560 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 CXCL11O14625 94 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 FARP2O94887 1054 aaPredicted RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 ERLIN2O94905 339 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 UBA1P22314 1058 aaKnown RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 CHRNA3P32297 505 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 POU5F1Q01860 360 aaKnown RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 TARBP2Q15633 366 aaKnown RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 PTPROQ16827 1216 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 TREML2Q5T2D2 321 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 DCAF12L1Q5VU92 463 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 PRRT2Q7Z6L0 340 aaPredicted RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 SULF1Q8IWU6 871 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 ASAP3Q8TDY4 903 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 TCP11Q8WWU5 503 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 SEPT1Q8WYJ6 367 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 RIN2Q8WYP3 895 aaPredicted RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 DDX1Q92499 740 aaKnown RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 CEP89Q96ST8 783 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 CGRRF1Q99675 332 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 NUP85Q9BW27 656 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 AVENQ9NQS1 362 aaPredicted RBP11.53□□□□□ -0.56
LINC00649-202ENST00000400353 BTBD7Q9P203 1132 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 PCDHB2Q9Y5E7 798 aa11.53□□□□□ -0.56
LINC00649-202ENST00000400353 GSTTP1A0A1W2PQM5 241 aa11.52□□□□□ -0.57
LINC00649-202ENST00000400353 SHOX2O60902 331 aaPredicted RBP11.52□□□□□ -0.57
LINC00649-202ENST00000400353 HLA-DRAP01903 254 aa11.52□□□□□ -0.57
LINC00649-202ENST00000400353 C4BPAP04003 597 aaKnown RBP11.52□□□□□ -0.57
LINC00649-202ENST00000400353 FAM153BP0C7A2 387 aa11.52□□□□□ -0.57
LINC00649-202ENST00000400353 POTEJP0CG39 1038 aa11.52□□□□□ -0.57
LINC00649-202ENST00000400353 ITGA4P13612 1032 aa11.52□□□□□ -0.57
LINC00649-202ENST00000400353 KRT5P13647 590 aa11.52□□□□□ -0.57
LINC00649-202ENST00000400353 TNNI1P19237 187 aa11.52□□□□□ -0.57
LINC00649-202ENST00000400353 TBXAS1P24557 533 aaPredicted RBP11.52□□□□□ -0.57
LINC00649-202ENST00000400353 CTNNA1P35221 906 aaKnown RBP11.52□□□□□ -0.57
LINC00649-202ENST00000400353 PIK3CAP42336 1068 aa11.52□□□□□ -0.57
LINC00649-202ENST00000400353 STAT5BP51692 787 aa11.52□□□□□ -0.57
LINC00649-202ENST00000400353 GUCY2FP51841 1108 aa11.52□□□□□ -0.57
LINC00649-202ENST00000400353 EFNA5P52803 228 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms