RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 ACAP3Q96P50 834 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.87□□□□□ -0.51
LAMA3-203ENST00000399516 MAPK6Q16659 721 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 SMARCAL1Q9NZC9 954 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 APEX2Q9UBZ4 518 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 ABCC3O15438 1527 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 DFFAO00273 331 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 PDXKO00764 312 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 TBC1D4O60343 1298 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 HUS1O60921 280 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 LRRC31Q6UY01 552 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 C4orf33Q8N1A6 199 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 OR2W6PQ8NHA6 318 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 CEP95Q96GE4 821 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 ASCC2Q9H1I8 757 aaPredicted RBP11.87□□□□□ -0.51
LAMA3-203ENST00000399516 SATB2Q9UPW6 733 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 CDHR2Q9BYE9 1310 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 ZNF609O15014 1411 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 NPHP3-ACAD11A0A0J9YXS1 232 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 RAD51CO43502 376 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 BNIP3LO60238 219 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 S100A5P33763 92 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 EIF3EP60228 445 aaKnown RBP11.87□□□□□ -0.51
LAMA3-203ENST00000399516 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 LZICQ8WZA0 190 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 SENP7Q9BQF6 1050 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 TRIM9Q9C026 710 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 SP110Q9HB58 689 aa11.87□□□□□ -0.51
LAMA3-203ENST00000399516 SERPINB3P29508 390 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 ATP6V1E1P36543 226 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 PPHLN1Q8NEY8 458 aaKnown RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 DHX35Q9H5Z1 703 aaKnown RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 AKAP10O43572 662 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 TMA16Q96EY4 203 aaKnown RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 GPR101Q96P66 508 aaPredicted RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 PCMTD2Q9NV79 361 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 GUCY1A2P33402 732 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 CCDC85BQ15834 202 aaPredicted RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 BTNL9Q6UXG8 535 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 JAMLQ86YT9 394 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 ADGRF4Q8IZF3 695 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 MTO1Q9Y2Z2 717 aaKnown RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 UBTFL6P0CB48 400 aaPredicted RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 SSTR3P32745 418 aaPredicted RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 ZC3H12BQ5HYM0 836 aaKnown RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 RNF135Q8IUD6 432 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 UVRAGQ9P2Y5 699 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 BLOC1S6Q9UL45 172 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 KCNN4O15554 427 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 SRP72O76094 671 aaKnown RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 ITIH2P19823 946 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 PTK7Q13308 1070 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 TC2NQ8N9U0 490 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 EIF2AK1Q9BQI3 630 aaKnown RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 CYP26A1O43174 497 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 MYO1DO94832 1006 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 NUP93Q8N1F7 819 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 PDCD6IPQ8WUM4 868 aaKnown RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 CDYLQ9Y232 598 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 TDP2O95551 362 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 ADSSL1Q8N142 457 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 UNC45AQ9H3U1 944 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 TRIM45Q9H8W5 580 aaPredicted RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 PDP2Q9P2J9 529 aa11.86□□□□□ -0.51
LAMA3-203ENST00000399516 DBR1Q9UK59 544 aaKnown RBP11.86□□□□□ -0.51
LAMA3-203ENST00000399516 NEMP1O14524 444 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 NME3Q13232 169 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 CYLC2Q14093 348 aaPredicted RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 NEUROG2Q9H2A3 272 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 CCDC134Q9H6E4 229 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 LMCD1Q9NZU5 365 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 WDR47O94967 919 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 DMC1Q14565 340 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 CLMNQ96JQ2 1002 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 STK33Q9BYT3 514 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 POLD4Q9HCU8 107 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 SSU72P8A0A1W2PR75 194 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 TRIP10Q15642 601 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 STOX1Q6ZVD7 989 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 SPATA17Q96L03 361 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 C16orf96A6NNT2 1141 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 C3orf20Q8ND61 904 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 KCNK16Q96T55 309 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 A0A1W2PQJ5 194 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 PRAMEP78395 509 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 MARCH10Q8NA82 808 aaPredicted RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 BEST2Q8NFU1 509 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 GCNAQ96QF7 691 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 CHP1Q99653 195 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 EPAS1Q99814 870 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 HSPA1AP0DMV8 641 aaKnown RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 HSPA1BP0DMV9 641 aaKnown RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 EXOSC10Q01780 885 aaKnown RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 NAB2Q15742 525 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 TAS2R42Q7RTR8 314 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 USP38Q8NB14 1042 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms