RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 NFIL3Q16649 462 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 C9orf72Q96LT7 481 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 A6NHS1 94 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 PEX11AO75192 247 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 GNAZP19086 355 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 ITIH2P19823 946 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 RBM26Q5T8P6 1007 aaKnown RBP14.93□□□□□ -0.02
APOB-202ENST00000399256 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 ZNF449Q6P9G9 518 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 SLC47A2Q86VL8 602 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 C7orf43Q8WVR3 580 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 MOV10L1Q9BXT6 1211 aaKnown RBP14.93□□□□□ -0.02
APOB-202ENST00000399256 RNPEPL1Q9HAU8 725 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 ANAPC5Q9UJX4 755 aa14.93□□□□□ -0.02
APOB-202ENST00000399256 MYBL1P10243 752 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 GM2AP17900 193 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 PCK1P35558 622 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 SREBF1P36956 1147 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 ADCY8P40145 1251 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 GTF2IP78347 998 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 IKQ13123 557 aaPredicted RBP14.92□□□□□ -0.02
APOB-202ENST00000399256 SETDB1Q15047 1291 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 TCEAL1Q15170 157 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 THEMIS2Q5TEJ8 643 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 EPS8L1Q8TE68 723 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 FAM118BQ9BPY3 351 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 GGA1Q9UJY5 639 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 CHKBQ9Y259 395 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 ADGRA3Q8IWK6 1321 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 CYP26A1O43174 497 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 SLITRK3O94933 977 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 ATF2P15336 505 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 ATP4AP20648 1035 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 IVDP26440 423 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 POLGP54098 1239 aaPredicted RBP14.92□□□□□ -0.02
APOB-202ENST00000399256 WDR4P57081 412 aaKnown RBP14.92□□□□□ -0.02
APOB-202ENST00000399256 CCDC15Q0P6D6 951 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 BIRC2Q13490 618 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 ACVR2BQ13705 512 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 SLFN13Q68D06 897 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 FLAD1Q8NFF5 587 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 PSPC1Q8WXF1 523 aaKnown RBP14.92□□□□□ -0.02
APOB-202ENST00000399256 HERPUD2Q9BSE4 406 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 KIAA1683Q9H0B3 1180 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 DPPA5A6NC42 116 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 RASA4BC9J798 803 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 POLRMTO00411 1230 aaKnown RBP14.92□□□□□ -0.02
APOB-202ENST00000399256 RASA4O43374 803 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 SERPINB2P05120 415 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 EEF2P13639 858 aaKnown RBP14.92□□□□□ -0.02
APOB-202ENST00000399256 CALB2P22676 271 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 CTCFP49711 727 aaPredicted RBP14.92□□□□□ -0.02
APOB-202ENST00000399256 IL9RQ01113 521 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 SLC15A2Q16348 729 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 ANO7Q6IWH7 933 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 C15orf52Q6ZUT6 534 aaKnown RBP14.92□□□□□ -0.02
APOB-202ENST00000399256 FAM13CQ8NE31 585 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 MORC4Q8TE76 937 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 HSD17B14Q9BPX1 270 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 LRMDAQ9H2I8 198 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 SLCO1B3Q9NPD5 702 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 NOCTQ9UK39 431 aaKnown RBP14.92□□□□□ -0.02
APOB-202ENST00000399256 STK24Q9Y6E0 443 aa14.92□□□□□ -0.02
APOB-202ENST00000399256 A0A1W2PRG0 241 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 MTA2O94776 668 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 RFX1P22670 979 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 ICA1Q05084 483 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 TMEM63BQ5T3F8 832 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 PPP1R21Q6ZMI0 780 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 LONP2Q86WA8 852 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 GRAMD1AQ96CP6 724 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 NUDCD1Q96RS6 583 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 AMNQ9BXJ7 453 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 CYP39A1Q9NYL5 469 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 C10orf71Q711Q0 1435 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 FSCN2O14926 492 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 EPHB2P29323 1055 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 CYP4F22Q6NT55 531 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 STXBP4Q6ZWJ1 553 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 ZSWIM2Q8NEG5 633 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 TTC8Q8TAM2 541 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 ELMO3Q96BJ8 720 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 LRRC37BQ96QE4 947 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 PHTF1Q9UMS5 762 aa14.91□□□□□ -0.02
APOB-202ENST00000399256 GSTTP1A0A1W2PQM5 241 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 CDH16O75309 829 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 TPBGLP0DKB5 382 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 TUBP50607 506 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 VAMP7P51809 220 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 INHBEP58166 350 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 PTK6Q13882 451 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 PARP6Q2NL67 630 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 PHLDB2Q86SQ0 1253 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 FBXO11Q86XK2 927 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 PPM1KQ8N3J5 372 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 STK32AQ8WU08 396 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 WRAP73Q9P2S5 460 aaPredicted RBP14.9□□□□□ -0.02
APOB-202ENST00000399256 LGALS13Q9UHV8 139 aa14.9□□□□□ -0.02
APOB-202ENST00000399256 R3HDM2Q9Y2K5 976 aaKnown RBP14.9□□□□□ -0.02
APOB-202ENST00000399256 QSER1Q2KHR3 1735 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms