RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 SND1Q7KZF4 910 aaKnown RBP eCLIP16.16■□□□□ 0.18
COL25A1-203ENST00000399132 FASTKD5Q7L8L6 764 aaKnown RBP16.16■□□□□ 0.18
COL25A1-203ENST00000399132 NT5DC3Q86UY8 548 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 THNSL1Q8IYQ7 743 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 RFFLQ8WZ73 363 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 SUFUQ9UMX1 484 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 IGKV6D-21A0A0A0MT36 114 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 INO80B-WBP1J3KQ70 363 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 HEXIM1O94992 359 aaKnown RBP16.16■□□□□ 0.18
COL25A1-203ENST00000399132 SLC25A27O95847 323 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 HLA-DRAP01903 254 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 CFHP08603 1231 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 ZNF286BP0CG31 522 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 MARCKSL1P49006 195 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 LAMTOR4Q0VGL1 99 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 IFI16Q16666 785 aaKnown RBP16.16■□□□□ 0.18
COL25A1-203ENST00000399132 ZNF394Q53GI3 561 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 FAM71AQ8IYT1 594 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 MMGT1Q8N4V1 131 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 CEP120Q8N960 986 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 HNRNPLLQ8WVV9 542 aaKnown RBP16.16■□□□□ 0.18
COL25A1-203ENST00000399132 PSPC1Q8WXF1 523 aaKnown RBP16.16■□□□□ 0.18
COL25A1-203ENST00000399132 CPA5Q8WXQ8 436 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 FBXL18Q96ME1 805 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 SELENOOQ9BVL4 669 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 INO80BQ9C086 356 aaPredicted RBP16.16■□□□□ 0.18
COL25A1-203ENST00000399132 TSKSQ9UJT2 592 aa16.16■□□□□ 0.18
COL25A1-203ENST00000399132 NOCTQ9UK39 431 aaKnown RBP16.16■□□□□ 0.18
COL25A1-203ENST00000399132 MAP2K7O14733 419 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 CLDN3O15551 220 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 TMEM253P0C7T8 217 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 GARTP22102 1010 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 LMAN1P49257 510 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 CARSP49589 748 aaKnown RBP16.15■□□□□ 0.18
COL25A1-203ENST00000399132 GUCY2FP51841 1108 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 FMO1Q01740 532 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 DAB2IPQ5VWQ8 1189 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 ARMCX2Q7L311 632 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 HVCN1Q96D96 273 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 NIFKQ9BYG3 293 aaKnown RBP16.15■□□□□ 0.18
COL25A1-203ENST00000399132 C1orf112Q9NSG2 853 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 AMFRQ9UKV5 643 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 NFU1Q9UMS0 254 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 NOC2LQ9Y3T9 749 aaKnown RBP16.15■□□□□ 0.18
COL25A1-203ENST00000399132 NR2E1Q9Y466 385 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 ARID2Q68CP9 1835 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 CCL15-CCL14A0A0B4J2E2 113 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 P4HA2O15460 535 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 ADORA2AP29274 412 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 ACTN2P35609 894 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 PDE6CP51160 858 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 PLCB4Q15147 1175 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 TARBP2Q15633 366 aaKnown RBP16.15■□□□□ 0.18
COL25A1-203ENST00000399132 CCL15Q16663 113 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 SWT1Q5T5J6 900 aaKnown RBP16.15■□□□□ 0.18
COL25A1-203ENST00000399132 DDX42Q86XP3 938 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL25A1-203ENST00000399132 USP38Q8NB14 1042 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 STIM2Q9P246 746 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 VPS18Q9P253 973 aa16.15■□□□□ 0.18
COL25A1-203ENST00000399132 ANKRD62A6NC57 917 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 RAD51CO43502 376 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 KIF1CO43896 1103 aaKnown RBP16.14■□□□□ 0.17
COL25A1-203ENST00000399132 ADCYAP1R1P41586 468 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 GPC3P51654 580 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 TUBB4BP68371 445 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 PPARDQ03181 441 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 SUGP1Q8IWZ8 645 aaKnown RBP16.14■□□□□ 0.17
COL25A1-203ENST00000399132 SHC3Q92529 594 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 SUCLA2Q9P2R7 463 aaPredicted RBP16.14■□□□□ 0.17
COL25A1-203ENST00000399132 GINS2Q9Y248 185 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 ZBTB42B2RXF5 422 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 BTBD19C9JJ37 291 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 KRIT1O00522 736 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 VNN1O95497 513 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 FGGP02679 453 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 CD58P19256 250 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 SNRPFP62306 86 aaKnown RBP16.14■□□□□ 0.17
COL25A1-203ENST00000399132 TMC2Q8TDI7 906 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 KRT35Q92764 455 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 EXOC4Q96A65 974 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 ZNF653Q96CK0 615 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 CELF4Q9BZC1 486 aaKnown RBP16.14■□□□□ 0.17
COL25A1-203ENST00000399132 TRIM31Q9BZY9 425 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 TRIM7Q9C029 511 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 PSD3Q9NYI0 1048 aa16.14■□□□□ 0.17
COL25A1-203ENST00000399132 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.13■□□□□ 0.17
COL25A1-203ENST00000399132 ADCY3O60266 1144 aa16.13■□□□□ 0.17
COL25A1-203ENST00000399132 MAFO75444 373 aaPredicted RBP16.13■□□□□ 0.17
COL25A1-203ENST00000399132 TGFB3P10600 412 aa16.13■□□□□ 0.17
COL25A1-203ENST00000399132 RTP1P59025 263 aa16.13■□□□□ 0.17
COL25A1-203ENST00000399132 WDR44Q5JSH3 913 aa16.13■□□□□ 0.17
COL25A1-203ENST00000399132 DCAF12L1Q5VU92 463 aa16.13■□□□□ 0.17
COL25A1-203ENST00000399132 EFCAB12Q6NXP0 572 aa16.13■□□□□ 0.17
COL25A1-203ENST00000399132 TMEM270Q6UE05 265 aa16.13■□□□□ 0.17
COL25A1-203ENST00000399132 SCARA5Q6ZMJ2 495 aa16.13■□□□□ 0.17
COL25A1-203ENST00000399132 USP37Q86T82 979 aa16.13■□□□□ 0.17
COL25A1-203ENST00000399132 LMBR1Q8WVP7 490 aa16.13■□□□□ 0.17
COL25A1-203ENST00000399132 L3MBTL3Q96JM7 780 aaPredicted RBP16.13■□□□□ 0.17
COL25A1-203ENST00000399132 APOBEC3GQ9HC16 384 aaKnown RBP16.13■□□□□ 0.17
COL25A1-203ENST00000399132 MED4Q9NPJ6 270 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms