RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ADALQ6DHV7 355 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ALKAL1Q6UXT8 129 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 VN1R2Q8NFZ6 395 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 HASPINQ8TF76 798 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 HPS3Q969F9 1004 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ZMAT2Q96NC0 199 aaKnown RBP15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 STRA6Q9BX79 667 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 COL25A1Q9BXS0 654 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TRIM9Q9C026 710 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ST6GALNAC4Q9H4F1 302 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 SEL1LQ9UBV2 794 aa15.41■□□□□ 0.06
HLA-DQB1-202ENST00000399079 SMIM28A0A1B0GU29 152 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 NCK2O43639 380 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 NR1I2O75469 434 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 PPP1R37O75864 691 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 PIGRP01833 764 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 MYBP10242 640 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CTSAP10619 480 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 BMP1P13497 986 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 PFKFB1P16118 471 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 SCP2P22307 547 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TNFSF9P41273 254 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 CLUL1Q15846 466 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 DUSP6Q16828 381 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 ZBTB41Q5SVQ8 909 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 GRAMD1CQ8IYS0 662 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 EFHBQ8N7U6 833 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 B3GALT6Q96L58 329 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 SNX27Q96L92 541 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 PPP1R10Q96QC0 940 aaKnown RBP15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 COLEC11Q9BWP8 271 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 SCAND2PQ9GZW5 306 aaPredicted RBP15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 BLZF1Q9H2G9 400 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 GOLGA2P5Q9HBQ8 144 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 OLFML3Q9NRN5 406 aa15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TOPORSQ9NS56 1045 aaPredicted RBP15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 BARX2Q9UMQ3 279 aaPredicted RBP15.4■□□□□ 0.06
HLA-DQB1-202ENST00000399079 TCHHQ07283 1943 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 C2CD2LO14523 706 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 FAM189A1O60320 539 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 GCNT3O95395 438 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 EFEMP2O95967 443 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 CMA1P23946 247 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 AFMP43652 599 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 NDUFV1P49821 464 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 NUCB2P80303 420 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 SOX4Q06945 474 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 COASYQ13057 564 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 HSP90AA2PQ14568 343 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 SLC10A6Q3KNW5 377 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 LEXMQ3ZCV2 418 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 XKR4Q5GH76 650 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 LLGL2Q6P1M3 1020 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 GLIS3Q8NEA6 775 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 GPR62Q9BZJ7 368 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 CLEC1BQ9P126 229 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 SERTAD1Q9UHV2 236 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 ADAM28Q9UKQ2 775 aa15.39■□□□□ 0.05
HLA-DQB1-202ENST00000399079 A0A0B4J269 797 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 KIF4AO95239 1232 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 SOD2P04179 222 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 CXCL8P10145 99 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 ASIC1P78348 528 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 AMPD3Q01432 767 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 PTPN14Q15678 1187 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 FUT10Q6P4F1 479 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 CCDC65Q8IXS2 484 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 RNF168Q8IYW5 571 aaPredicted RBP15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 TMEM130Q8N3G9 435 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 NECAB3Q96P71 396 aaPredicted RBP15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 C7orf25Q9BPX7 421 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 MSTO1Q9BUK6 570 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 LRRC27Q9C0I9 530 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 CNTN3Q9P232 1028 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 IRAK3Q9Y616 596 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 TRIP11Q15643 1979 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 TTC28Q96AY4 2481 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 TCF20Q9UGU0 1960 aaKnown RBP15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 ACTN4O43707 911 aaKnown RBP15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 TADA2AO75478 443 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 CLTAP09496 248 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 ABCD1P33897 745 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 CLCNKBP51801 687 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 SPAG1Q07617 926 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 CUL4BQ13620 913 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 KCNC3Q14003 757 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 BMS1Q14692 1282 aaKnown RBP15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 C18orf25Q96B23 403 aaPredicted RBP15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 CDCA3Q99618 268 aaPredicted RBP15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 HPSEQ9Y251 543 aa15.38■□□□□ 0.05
HLA-DQB1-202ENST00000399079 DLL1O00548 723 aa15.37■□□□□ 0.05
HLA-DQB1-202ENST00000399079 OGTO15294 1046 aa15.37■□□□□ 0.05
HLA-DQB1-202ENST00000399079 LILRB3O75022 631 aa15.37■□□□□ 0.05
HLA-DQB1-202ENST00000399079 CLASP2O75122 1294 aaKnown RBP15.37■□□□□ 0.05
HLA-DQB1-202ENST00000399079 PRPF6O94906 941 aaKnown RBP15.37■□□□□ 0.05
HLA-DQB1-202ENST00000399079 SLFN14P0C7P3 912 aa15.37■□□□□ 0.05
HLA-DQB1-202ENST00000399079 IL9P15248 144 aa15.37■□□□□ 0.05
HLA-DQB1-202ENST00000399079 KCNE1P15382 129 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms