RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 MTUS1Q9ULD2 1270 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 KDM3AQ9Y4C1 1321 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 ZBBXA8MT70 800 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 KCNQ2O43526 872 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 ECEL1O95672 775 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 HOXA13P31271 388 aaPredicted RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 COILP38432 576 aaPredicted RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 SLC12A3P55017 1021 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 MARSP56192 900 aaKnown RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 INHBEP58166 350 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 UBXN2AP68543 259 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 KRT17Q04695 432 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 BLMHQ13867 455 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 NFIXQ14938 502 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 MUM1Q2TAK8 710 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 SGO2Q562F6 1265 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 RPUSD2Q8IZ73 545 aaKnown RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 C4orf33Q8N1A6 199 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 TAB3Q8N5C8 712 aaPredicted RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 TBC1D16Q8TBP0 767 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 WNT2BQ93097 391 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 UTP4Q969X6 686 aaKnown RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 RPS6KC1Q96S38 1066 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 SH2D3AQ9BRG2 576 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 KCNQ5Q9NR82 932 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 DCTN4Q9UJW0 460 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 PCDHA1Q9Y5I3 950 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 ASTN1O14525 1302 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 PASKQ96RG2 1323 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 LRRD1A4D1F6 860 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 TISP43B9A030 160 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 RASA4BC9J798 803 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 RASA4O43374 803 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 EXOC3O60645 756 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 FOXN2P32314 431 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 FMO5P49326 533 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 JAM2P57087 298 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 SEPT2Q15019 361 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 RBBP5Q15291 538 aaKnown RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 RNF207Q6ZRF8 634 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 APBB1IPQ7Z5R6 666 aaPredicted RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 KCTD12Q96CX2 325 aaKnown RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 KIAA1683Q9H0B3 1180 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 INTS2Q9H0H0 1204 aaKnown RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 RIOX1Q9H6W3 641 aa10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 ALG13Q9NP73 1137 aaKnown RBP10.56□□□□□ -0.72
PTCHD4-202ENST00000398738 WNK3Q9BYP7 1800 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 A0A0A6YYK5 440 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 ANKRD62A6NC57 917 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 PODXLO00592 558 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 CETPP11597 493 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 GM2AP17900 193 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 PTPN5P54829 565 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 RRP1BQ14684 758 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 GALNTL6Q49A17 601 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 EPC2Q52LR7 807 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 RNF220Q5VTB9 566 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 SLC30A9Q6PML9 568 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 ADAM32Q8TC27 787 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 METTL14Q9HCE5 456 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 TYW1Q9NV66 732 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 PARP4Q9UKK3 1724 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 CORO1CQ9ULV4 474 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 SUGT1Q9Y2Z0 365 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 PCDHB9Q9Y5E1 797 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 CASZ1Q86V15 1759 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 TAF1P21675 1872 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 PNMA6FA0A0J9YX94 578 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 SOWAHBA6NEL2 793 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 CHRNB2P17787 502 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 PSMC2P35998 433 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 GCLMP48507 274 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 ANO7Q6IWH7 933 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 CGB2Q6NT52 195 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 FAM43BQ6ZT52 329 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 LMNTD2Q8IXW0 634 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 GBP7Q8N8V2 638 aaPredicted RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 LRRC37BQ96QE4 947 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 SYT15Q9BQS2 421 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 ZSWIM1Q9BR11 485 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 STK33Q9BYT3 514 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 PAPOLBQ9NRJ5 636 aaKnown RBP10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 CHST7Q9NS84 486 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 PKD2L1Q9P0L9 805 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 NAALADL1Q9UQQ1 740 aa10.55□□□□□ -0.72
PTCHD4-202ENST00000398738 PDXKO00764 312 aa10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 TGFB1I1O43294 461 aa10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 NEFHP12036 1026 aa10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 KRT15P19012 456 aa10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 YY1P25490 414 aa10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 ITGA8P53708 1063 aa10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 MYL7Q01449 175 aa10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 SHROOM1Q2M3G4 852 aaPredicted RBP10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 EAPPQ56P03 285 aaPredicted RBP10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 C4orf48Q5BLP8 95 aa10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 CNBD1Q8NA66 436 aa10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 UCMAQ8WVF2 138 aa10.54□□□□□ -0.72
PTCHD4-202ENST00000398738 TEKT4Q8WW24 435 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms