RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ATAT1Q5SQI0 421 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 KIAA0319Q5VV43 1072 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 ZBTB33Q86T24 672 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 C12orf76Q8N812 135 aaPredicted RBP14.73□□□□□ -0.05
VCX3A-202ENST00000398729 CALML4Q96GE6 196 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 SFXN1Q9H9B4 322 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 CHST7Q9NS84 486 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 SORCS3Q9UPU3 1222 aa14.73□□□□□ -0.05
VCX3A-202ENST00000398729 SF3B1O75533 1304 aaKnown RBP eCLIP14.72□□□□□ -0.05
VCX3A-202ENST00000398729 DMXL1Q9Y485 3027 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 PRR23AA6NEV1 266 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 CASTOR2A6NHX0 329 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 TEX28O15482 410 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 PLS3P13797 630 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 SMTNP53814 917 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 SLC12A3P55017 1021 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 RAD51AP2Q09MP3 1159 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 SF3A1Q15459 793 aaKnown RBP14.72□□□□□ -0.05
VCX3A-202ENST00000398729 USP41Q3LFD5 358 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 ZNF568Q3ZCX4 644 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 TMEM119Q4V9L6 283 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 KANK3Q6NY19 840 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 ELMSAN1Q6PJG2 1045 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 GPR65Q8IYL9 337 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 UBALD2Q8IYN6 164 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 FEZF2Q8TBJ5 459 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 RABGGTAQ92696 567 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 ACO2Q99798 780 aaKnown RBP14.72□□□□□ -0.05
VCX3A-202ENST00000398729 NTPCRQ9BSD7 190 aaKnown RBP14.72□□□□□ -0.05
VCX3A-202ENST00000398729 TARS2Q9BW92 718 aaKnown RBP14.72□□□□□ -0.05
VCX3A-202ENST00000398729 GPR62Q9BZJ7 368 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 RXFP1Q9HBX9 757 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 TSHZ2Q9NRE2 1034 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.72□□□□□ -0.05
VCX3A-202ENST00000398729 CACNG4Q9UBN1 327 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 DPP7Q9UHL4 492 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 MYH11P35749 1972 aa14.72□□□□□ -0.05
VCX3A-202ENST00000398729 SLC16A4O15374 487 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 ASGR2P07307 311 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 WEE2P0C1S8 567 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 LONP1P36776 959 aaKnown RBP14.71□□□□□ -0.05
VCX3A-202ENST00000398729 GRM5P41594 1212 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 YARSP54577 528 aaKnown RBP14.71□□□□□ -0.05
VCX3A-202ENST00000398729 STRN3Q13033 797 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 TMC5Q6UXY8 1006 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 TAS1R3Q7RTX0 852 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 RASSF8Q8NHQ8 419 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 SPIRE2Q8WWL2 714 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 INTS4Q96HW7 963 aaKnown RBP14.71□□□□□ -0.05
VCX3A-202ENST00000398729 PAAF1Q9BRP4 392 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 TCHPQ9BT92 498 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 CCDC94Q9BW85 323 aaPredicted RBP14.71□□□□□ -0.05
VCX3A-202ENST00000398729 CDT1Q9H211 546 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 TOPORSQ9NS56 1045 aaPredicted RBP14.71□□□□□ -0.05
VCX3A-202ENST00000398729 LARSQ9P2J5 1176 aaKnown RBP14.71□□□□□ -0.05
VCX3A-202ENST00000398729 LIMD1Q9UGP4 676 aa14.71□□□□□ -0.05
VCX3A-202ENST00000398729 KIF4AO95239 1232 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 GLUD1P00367 558 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 CREMQ03060 361 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 MTMR3Q13615 1198 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 NAB2Q15742 525 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 GLRA4Q5JXX5 417 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 ASTLQ6HA08 431 aaPredicted RBP14.7□□□□□ -0.06
VCX3A-202ENST00000398729 GPR149Q86SP6 731 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 TMEM161BQ8NDZ6 487 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 HASPINQ8TF76 798 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 RIN2Q8WYP3 895 aaPredicted RBP14.7□□□□□ -0.06
VCX3A-202ENST00000398729 B3GALT6Q96L58 329 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 CXCL16Q9H2A7 254 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 PTPRHQ9HD43 1115 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 MAN1C1Q9NR34 630 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 FNIP2Q9P278 1114 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 ODF2LQ9ULJ1 636 aa14.7□□□□□ -0.06
VCX3A-202ENST00000398729 H0YCG3 227 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 K7ELQ4 463 aaPredicted RBP14.69□□□□□ -0.06
VCX3A-202ENST00000398729 C1RP00736 705 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 MCF2P10911 925 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 SYT1P21579 422 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 OSTNP61366 133 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 ELAVL2Q12926 359 aaKnown RBP14.69□□□□□ -0.06
VCX3A-202ENST00000398729 FAM171A1Q5VUB5 890 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 MPZL3Q6UWV2 235 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 C15orf39Q6ZRI6 1047 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 FRMD5Q7Z6J6 570 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 GPBP1Q86WP2 473 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 CEP120Q8N960 986 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 ACAP3Q96P50 834 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 PPP1R10Q96QC0 940 aaKnown RBP14.69□□□□□ -0.06
VCX3A-202ENST00000398729 CLIC4Q9Y696 253 aa14.69□□□□□ -0.06
VCX3A-202ENST00000398729 TRIP11Q15643 1979 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 NPHP3-ACAD11A0A0J9YXS1 232 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 PI15O43692 258 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 TOM1L1O75674 476 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 B3GAT3O94766 335 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 MAPTP10636 758 aaKnown RBP14.68□□□□□ -0.06
VCX3A-202ENST00000398729 NPR3P17342 541 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 PLCG1P19174 1290 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 PROZP22891 400 aa14.68□□□□□ -0.06
VCX3A-202ENST00000398729 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
VCX3A-202ENST00000398729 GRIN1Q05586 938 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms