RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 POLR3GO15318 223 aaPredicted RBP16.43■□□□□ 0.22
MBD1-209ENST00000398495 MSCO60682 206 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 LDHAP00338 332 aaKnown RBP16.43■□□□□ 0.22
MBD1-209ENST00000398495 GPC5P78333 572 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 GPR162Q16538 588 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 GLE1Q53GS7 698 aaKnown RBP16.43■□□□□ 0.22
MBD1-209ENST00000398495 GJC2Q5T442 439 aaPredicted RBP16.43■□□□□ 0.22
MBD1-209ENST00000398495 ZBTB33Q86T24 672 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 RHOT2Q8IXI1 618 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 GPRC5AQ8NFJ5 357 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 TCP11Q8WWU5 503 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 SELENOOQ9BVL4 669 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 PLEKHA4Q9H4M7 779 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 CTTNBP2NLQ9P2B4 639 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 TRPC6Q9Y210 931 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 ASB14A6NK59 587 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 PGRMC1O00264 195 aaKnown RBP16.43■□□□□ 0.22
MBD1-209ENST00000398495 TNFSF9P41273 254 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 HADHBP55084 474 aaKnown RBP16.43■□□□□ 0.22
MBD1-209ENST00000398495 TTLL4Q14679 1199 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 ZPBP2Q6X784 338 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 KLHL7Q8IXQ5 586 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 RASGEF1CQ8N431 466 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 MSL3Q8N5Y2 521 aaKnown RBP16.43■□□□□ 0.22
MBD1-209ENST00000398495 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 MS4A4AQ96JQ5 239 aa16.43■□□□□ 0.22
MBD1-209ENST00000398495 ZNF668Q96K58 619 aaPredicted RBP16.43■□□□□ 0.22
MBD1-209ENST00000398495 DIS3Q9Y2L1 958 aaKnown RBP16.43■□□□□ 0.22
MBD1-209ENST00000398495 ZSCAN5CA6NGD5 496 aaPredicted RBP16.42■□□□□ 0.22
MBD1-209ENST00000398495 BTBD19C9JJ37 291 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 FAM189A1O60320 539 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 PRKCBP05771 671 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 GJB1P08034 283 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 GLI1P08151 1106 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 GZMAP12544 262 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 EFNA5P52803 228 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 ARHGAP1Q07960 439 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 TCEAL1Q15170 157 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 ZNF792Q3KQV3 632 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 DCAF12L1Q5VU92 463 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 SCARA3Q6AZY7 606 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 ENOSF1Q7L5Y1 443 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
MBD1-209ENST00000398495 RNF149Q8NC42 400 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 SCFD2Q8WU76 684 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 GTF3C2Q8WUA4 911 aaPredicted RBP16.42■□□□□ 0.22
MBD1-209ENST00000398495 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.42■□□□□ 0.228e-7■■□□□ 13.4
MBD1-209ENST00000398495 AP1M1Q9BXS5 423 aa16.42■□□□□ 0.22
MBD1-209ENST00000398495 MRPL4Q9BYD3 311 aaKnown RBP16.42■□□□□ 0.22
MBD1-209ENST00000398495 APOBEC3GQ9HC16 384 aaKnown RBP16.42■□□□□ 0.22
MBD1-209ENST00000398495 CCL15-CCL14A0A0B4J2E2 113 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 LOC102724159A0A0B4J2E5 919 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 TMEM110-MUSTN1A8MSY1 372 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 GAS2O43903 313 aaKnown RBP16.41■□□□□ 0.22
MBD1-209ENST00000398495 HEXIM1O94992 359 aaKnown RBP16.41■□□□□ 0.22
MBD1-209ENST00000398495 TNFRSF8P28908 595 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 ADORA2AP29274 412 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 TNNC1P63316 161 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 PWP2Q15269 919 aaKnown RBP16.41■□□□□ 0.22
MBD1-209ENST00000398495 CCL15Q16663 113 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 WDR44Q5JSH3 913 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 C11orf63Q6NUN7 778 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 BRI3BPQ8WY22 251 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 ACO2Q99798 780 aaKnown RBP16.41■□□□□ 0.22
MBD1-209ENST00000398495 SMARCAD1Q9H4L7 1026 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 ZCCHC17Q9NP64 241 aaKnown RBP16.41■□□□□ 0.22
MBD1-209ENST00000398495 HPCAL4Q9UM19 191 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 UMODL1Q5DID0 1318 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 ABLIM1O14639 778 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 RAD51CO43502 376 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 GRIN3BO60391 1043 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 CETPP11597 493 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 MXD4Q14582 209 aaPredicted RBP16.41■□□□□ 0.22
MBD1-209ENST00000398495 CLEC16AQ2KHT3 1053 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 TAPT1Q6NXT6 567 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 RHPN2Q8IUC4 686 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 BRSK2Q8IWQ3 736 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 ZBTB8OSQ8IWT0 167 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 ZSWIM8A7E2V4 1837 aa16.41■□□□□ 0.22
MBD1-209ENST00000398495 CLDN3O15551 220 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 TOM1L1O75674 476 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 CYP1A2P05177 515 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 CLCN3P51790 818 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 MAMDC4Q6UXC1 1216 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 ZNF653Q96CK0 615 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 GDF3Q9NR23 364 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 A0A0U1RQG5 324 aaPredicted RBP16.4■□□□□ 0.22
MBD1-209ENST00000398495 ESYT3A0FGR9 886 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 MTA2O94776 668 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 ITGA4P13612 1032 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 ACO1P21399 889 aaKnown RBP16.4■□□□□ 0.22
MBD1-209ENST00000398495 SLC26A2P50443 739 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 CCNA1P78396 465 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 GUCY2DQ02846 1103 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 SND1Q7KZF4 910 aaKnown RBP eCLIP16.4■□□□□ 0.22
MBD1-209ENST00000398495 CPNE8Q86YQ8 564 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 FAM81BQ96LP2 452 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 NLRP4Q96MN2 994 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 RNPEPQ9H4A4 650 aa16.4■□□□□ 0.22
MBD1-209ENST00000398495 VIPAS39Q9H9C1 493 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms