RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 PTPN14Q15678 1187 aa13.97□□□□□ -0.17
VPREB3-202ENST00000398465 CNNM4Q6P4Q7 775 aa13.97□□□□□ -0.17
VPREB3-202ENST00000398465 TMEM184AQ6ZMB5 413 aa13.97□□□□□ -0.17
VPREB3-202ENST00000398465 GPR65Q8IYL9 337 aa13.97□□□□□ -0.17
VPREB3-202ENST00000398465 UROC1Q96N76 676 aa13.97□□□□□ -0.17
VPREB3-202ENST00000398465 PPP1R10Q96QC0 940 aaKnown RBP13.97□□□□□ -0.17
VPREB3-202ENST00000398465 SLC38A7Q9NVC3 462 aa13.97□□□□□ -0.17
VPREB3-202ENST00000398465 CNTN3Q9P232 1028 aa13.97□□□□□ -0.17
VPREB3-202ENST00000398465 ADAM28Q9UKQ2 775 aa13.97□□□□□ -0.17
VPREB3-202ENST00000398465 SSX2IPQ9Y2D8 614 aa13.97□□□□□ -0.17
VPREB3-202ENST00000398465 H3BQ06 376 aaPredicted RBP13.96□□□□□ -0.17
VPREB3-202ENST00000398465 LINC01565O15544 149 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 HARSP12081 509 aaKnown RBP13.96□□□□□ -0.17
VPREB3-202ENST00000398465 NMT1P30419 496 aaKnown RBP13.96□□□□□ -0.17
VPREB3-202ENST00000398465 AMPD3Q01432 767 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 COASYQ13057 564 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 SMAD4Q13485 552 aaKnown RBP13.96□□□□□ -0.17
VPREB3-202ENST00000398465 PTCRAQ6ISU1 281 aaPredicted RBP13.96□□□□□ -0.17
VPREB3-202ENST00000398465 FUT10Q6P4F1 479 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 ALKAL1Q6UXT8 129 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 ZBTB33Q86T24 672 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 RBM23Q86U06 439 aaKnown RBP13.96□□□□□ -0.17
VPREB3-202ENST00000398465 CCDC65Q8IXS2 484 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.96□□□□□ -0.17
VPREB3-202ENST00000398465 LEO1Q8WVC0 666 aaPredicted RBP13.96□□□□□ -0.17
VPREB3-202ENST00000398465 DHX58Q96C10 678 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 MSLNLQ96KJ4 702 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 SPATA32Q96LK8 384 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 ACAP3Q96P50 834 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 TRIM9Q9C026 710 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 SCAND2PQ9GZW5 306 aaPredicted RBP13.96□□□□□ -0.17
VPREB3-202ENST00000398465 IGFLR1Q9H665 355 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 MRPL44Q9H9J2 332 aaKnown RBP13.96□□□□□ -0.17
VPREB3-202ENST00000398465 CD207Q9UJ71 328 aa13.96□□□□□ -0.17
VPREB3-202ENST00000398465 C2orf16Q68DN1 1984 aa13.96□□□□□ -0.18
VPREB3-202ENST00000398465 CASTOR2A6NHX0 329 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 FAM189A1O60320 539 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 KIF4AO95239 1232 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 CLTAP09496 248 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 IDEP14735 1019 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 KCNE1P15382 129 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 MATR3P43243 847 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPREB3-202ENST00000398465 GLUD2P49448 558 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 NUCB2P80303 420 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 CREMQ03060 361 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 DLX2Q07687 328 aaPredicted RBP13.95□□□□□ -0.18
VPREB3-202ENST00000398465 GLRA4Q5JXX5 417 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 EP400NLQ6ZTU2 488 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 ZNF720Q7Z2F6 126 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 PPFIBP1Q86W92 1011 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 SMRP1Q8NCR6 262 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 VN1R2Q8NFZ6 395 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 CASP10Q92851 521 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 UHRF1Q96T88 793 aaPredicted RBP13.95□□□□□ -0.18
VPREB3-202ENST00000398465 STRA6Q9BX79 667 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 EMILIN2Q9BXX0 1053 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 PLEKHA5Q9HAU0 1116 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 MRPL17Q9NRX2 175 aaKnown RBP13.95□□□□□ -0.18
VPREB3-202ENST00000398465 CLEC1BQ9P126 229 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 EXOC7Q9UPT5 735 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 HCFC2Q9Y5Z7 792 aa13.95□□□□□ -0.18
VPREB3-202ENST00000398465 A0A0B4J269 797 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 SMIM28A0A1B0GU29 152 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 GRXCR2A6NFK2 248 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 DLL1O00548 723 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 PER2O15055 1255 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 OGTO15294 1046 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 POLR2DO15514 142 aaKnown RBP13.94□□□□□ -0.18
VPREB3-202ENST00000398465 CA8P35219 290 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 OSTNP61366 133 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 DSG1Q02413 1049 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 PPP2R3AQ06190 1150 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 ELAVL2Q12926 359 aaKnown RBP13.94□□□□□ -0.18
VPREB3-202ENST00000398465 ZC2HC1CQ53FD0 456 aaPredicted RBP13.94□□□□□ -0.18
VPREB3-202ENST00000398465 L1TD1Q5T7N2 865 aaKnown RBP13.94□□□□□ -0.18
VPREB3-202ENST00000398465 ADALQ6DHV7 355 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 SLFN12LQ6IEE8 588 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 SLC39A4Q6P5W5 647 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 STXBP4Q6ZWJ1 553 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 ZBTB45Q96K62 511 aaPredicted RBP13.94□□□□□ -0.18
VPREB3-202ENST00000398465 TSPAN18Q96SJ8 248 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 PAAF1Q9BRP4 392 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 PANK2Q9BZ23 570 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 HAPLN2Q9GZV7 340 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 CXCL16Q9H2A7 254 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.94□□□□□ -0.18
VPREB3-202ENST00000398465 CHST7Q9NS84 486 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 PANK4Q9NVE7 773 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 DZANK1Q9NVP4 752 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 USP25Q9UHP3 1055 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 KCNH3Q9ULD8 1083 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 BARX2Q9UMQ3 279 aaPredicted RBP13.94□□□□□ -0.18
VPREB3-202ENST00000398465 STYXL1Q9Y6J8 313 aa13.94□□□□□ -0.18
VPREB3-202ENST00000398465 UBE4BO95155 1302 aa13.93□□□□□ -0.18
VPREB3-202ENST00000398465 F8W810 466 aa13.93□□□□□ -0.18
VPREB3-202ENST00000398465 MBTPS2O43462 519 aa13.93□□□□□ -0.18
VPREB3-202ENST00000398465 LILRB3O75022 631 aa13.93□□□□□ -0.18
VPREB3-202ENST00000398465 CLASP2O75122 1294 aaKnown RBP13.93□□□□□ -0.18
VPREB3-202ENST00000398465 GCNT3O95395 438 aa13.93□□□□□ -0.18
VPREB3-202ENST00000398465 CXCL14O95715 111 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms