RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PUS10Q3MIT2 529 aaKnown RBP18.28■□□□□ 0.52
APTR-201ENST00000398043 ZC2HC1CQ53FD0 456 aaPredicted RBP18.28■□□□□ 0.52
APTR-201ENST00000398043 RESP18Q5W5W9 173 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 EP400NLQ6ZTU2 488 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 MAP4K3Q8IVH8 894 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 SMRP1Q8NCR6 262 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 RABGGTAQ92696 567 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 SNX27Q96L92 541 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 ZMAT2Q96NC0 199 aaKnown RBP18.28■□□□□ 0.52
APTR-201ENST00000398043 TCHPQ9BT92 498 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 CCDC94Q9BW85 323 aaPredicted RBP18.28■□□□□ 0.52
APTR-201ENST00000398043 COLEC11Q9BWP8 271 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 GPR62Q9BZJ7 368 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 ZHX3Q9H4I2 956 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 CHST7Q9NS84 486 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 SEL1LQ9UBV2 794 aa18.28■□□□□ 0.52
APTR-201ENST00000398043 BARX2Q9UMQ3 279 aaPredicted RBP18.28■□□□□ 0.52
APTR-201ENST00000398043 SCN1AP35498 2009 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 DENND4AQ7Z401 1863 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 CLDN3O15551 220 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 MBTPS2O43462 519 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 KCNE1P15382 129 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 GAP43P17677 238 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 IGFBP6P24592 240 aaPredicted RBP18.27■□□□□ 0.52
APTR-201ENST00000398043 NDUFV1P49821 464 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 SOX4Q06945 474 aaPredicted RBP18.27■□□□□ 0.52
APTR-201ENST00000398043 HSP90AA2PQ14568 343 aaPredicted RBP18.27■□□□□ 0.52
APTR-201ENST00000398043 SLC10A6Q3KNW5 377 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 GLRA4Q5JXX5 417 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 KIAA0319Q5VV43 1072 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 CNNM4Q6P4Q7 775 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 CD300LGQ6UXG3 332 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 SLC22A17Q8WUG5 538 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 ACAP3Q96P50 834 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 UHRF1Q96T88 793 aaPredicted RBP18.27■□□□□ 0.52
APTR-201ENST00000398043 TNMDQ9H2S6 317 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 CUEDC2Q9H467 287 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 OLFML3Q9NRN5 406 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 CNTN3Q9P232 1028 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 ANKFY1Q9P2R3 1169 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 CD207Q9UJ71 328 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 ADAM28Q9UKQ2 775 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 STYXL1Q9Y6J8 313 aa18.27■□□□□ 0.52
APTR-201ENST00000398043 MYO10Q9HD67 2058 aa18.27■□□□□ 0.51
APTR-201ENST00000398043 A0A0B4J269 797 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.26■□□□□ 0.51
APTR-201ENST00000398043 CASTOR2A6NHX0 329 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 NR1I2O75469 434 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 KIF4AO95239 1232 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 ADRB2P07550 413 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 ABCD1P33897 745 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 ME1P48163 572 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 DSG1Q02413 1049 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 BECN1Q14457 450 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 SEZ6Q53EL9 994 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 FUT10Q6P4F1 479 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 SYCE2Q6PIF2 218 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 GPR65Q8IYL9 337 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 LEO1Q8WVC0 666 aaPredicted RBP18.26■□□□□ 0.51
APTR-201ENST00000398043 STAMQ92783 540 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 DHX58Q96C10 678 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 FGFBP2Q9BYJ0 223 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 S1PR5Q9H228 398 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 TOPORSQ9NS56 1045 aaPredicted RBP18.26■□□□□ 0.51
APTR-201ENST00000398043 HCFC2Q9Y5Z7 792 aa18.26■□□□□ 0.51
APTR-201ENST00000398043 ANKRD63C9JTQ0 380 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 TMEM189-UBE2V1I3L0A0 370 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 HNRNPDLO14979 420 aaKnown RBP18.25■□□□□ 0.51
APTR-201ENST00000398043 CNPP09543 421 aaKnown RBP18.25■□□□□ 0.51
APTR-201ENST00000398043 LIG4P49917 911 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 CASP5P51878 434 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 YARSP54577 528 aaKnown RBP18.25■□□□□ 0.51
APTR-201ENST00000398043 KCNA1Q09470 495 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 SMAD4Q13485 552 aaKnown RBP18.25■□□□□ 0.51
APTR-201ENST00000398043 BMS1Q14692 1282 aaKnown RBP18.25■□□□□ 0.51
APTR-201ENST00000398043 SMAD2Q15796 467 aaKnown RBP18.25■□□□□ 0.51
APTR-201ENST00000398043 CLUL1Q15846 466 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 UPP1Q16831 310 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 ZBTB41Q5SVQ8 909 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 ANKRD54Q6NXT1 300 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 IQUBQ8NA54 791 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 HVCN1Q96D96 273 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 KLHL5Q96PQ7 755 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 TRIM9Q9C026 710 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 IKZF4Q9H2S9 585 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 RXFP1Q9HBX9 757 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 CD320Q9NPF0 282 aa18.25■□□□□ 0.51
APTR-201ENST00000398043 TTC26A0AVF1 554 aa18.24■□□□□ 0.51
APTR-201ENST00000398043 TISP43B9A030 160 aa18.24■□□□□ 0.51
APTR-201ENST00000398043 POLR2DO15514 142 aaKnown RBP18.24■□□□□ 0.51
APTR-201ENST00000398043 CLTAP09496 248 aa18.24■□□□□ 0.51
APTR-201ENST00000398043 HARSP12081 509 aaKnown RBP18.24■□□□□ 0.51
APTR-201ENST00000398043 TNFSF9P41273 254 aa18.24■□□□□ 0.51
APTR-201ENST00000398043 GLUD2P49448 558 aa18.24■□□□□ 0.51
APTR-201ENST00000398043 C3orf58Q8NDZ4 430 aa18.24■□□□□ 0.51
APTR-201ENST00000398043 SUSD6Q92537 303 aa18.24■□□□□ 0.51
APTR-201ENST00000398043 BICD1Q96G01 975 aa18.24■□□□□ 0.51
APTR-201ENST00000398043 B3GALT6Q96L58 329 aa18.24■□□□□ 0.51
APTR-201ENST00000398043 GOLGA2P5Q9HBQ8 144 aa18.24■□□□□ 0.51
APTR-201ENST00000398043 MRPL17Q9NRX2 175 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms