RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 CBWD1Q9BRT8 395 aa8.3□□□□□ -1.08
LINC00887-201ENST00000397644 FAM213AQ9BRX8 229 aa8.3□□□□□ -1.08
LINC00887-201ENST00000397644 HIPK3Q9H422 1215 aa8.3□□□□□ -1.08
LINC00887-201ENST00000397644 METTL14Q9HCE5 456 aaKnown RBP8.3□□□□□ -1.08
LINC00887-201ENST00000397644 CHST12Q9NRB3 414 aa8.3□□□□□ -1.08
LINC00887-201ENST00000397644 ANKFY1Q9P2R3 1169 aa8.3□□□□□ -1.08
LINC00887-201ENST00000397644 PADI3Q9ULW8 664 aa8.3□□□□□ -1.08
LINC00887-201ENST00000397644 STYXL1Q9Y6J8 313 aa8.3□□□□□ -1.08
LINC00887-201ENST00000397644 SQORQ9Y6N5 450 aa8.3□□□□□ -1.08
LINC00887-201ENST00000397644 LOXHD1Q8IVV2 1947 aa8.3□□□□□ -1.08
LINC00887-201ENST00000397644 EVPLQ92817 2033 aa8.3□□□□□ -1.08
LINC00887-201ENST00000397644 FSD2A1L4K1 749 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 LRRC10BA6NIK2 292 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 PES1O00541 588 aaKnown RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 OGTO15294 1046 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 EXTL3O43909 919 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 GFRA3O60609 400 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 AKAP3O75969 853 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 EDN1P05305 212 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 CLTBP09497 229 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 MCF2P10911 925 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 ATP1A3P13637 1013 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 EEF1GP26641 437 aaKnown RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 HOXA11P31270 313 aaPredicted RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 CD52P31358 61 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 CYP2C18P33260 490 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 CASP4P49662 377 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 ACOT2P49753 483 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 CCL23P55773 120 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 UBASH3AP57075 661 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 OSTNP61366 133 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 FANCCQ00597 558 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 MCL1Q07820 350 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 PAK2Q13177 524 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 LPIN1Q14693 890 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 QPCTQ16769 361 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 PUS10Q3MIT2 529 aaKnown RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 EEF1DP3Q658K8 133 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 TWF2Q6IBS0 349 aaKnown RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 SLC27A1Q6PCB7 646 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 LRRC8DQ7L1W4 858 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 FAM228AQ86W67 206 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 IRF2BP1Q8IU81 584 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 FAM186BQ8IYM0 893 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 GPD1LQ8N335 351 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 TMEM174Q8WUU8 243 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 NOC4LQ9BVI4 516 aaKnown RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 PPP1R12CQ9BZL4 782 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 TRIM6Q9C030 488 aaPredicted RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 TRIM5Q9C035 493 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 VPS16Q9H269 839 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 AGO3Q9H9G7 860 aaKnown RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 PTPRHQ9HD43 1115 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 PRDM5Q9NQX1 630 aaPredicted RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 PRKAG2Q9UGJ0 569 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 ARMCX3Q9UH62 379 aaPredicted RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 PIN4Q9Y237 131 aaKnown RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 COL4A4P53420 1690 aaPredicted RBP8.29□□□□□ -1.08
LINC00887-201ENST00000397644 SCN10AQ9Y5Y9 1956 aa8.29□□□□□ -1.08
LINC00887-201ENST00000397644 ZMYM2Q9UBW7 1377 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 RNF223E7ERA6 249 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 SLC16A3O15427 465 aaKnown RBP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 CBFA2T2O43439 604 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 LILRB3O75022 631 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 PARNO95453 639 aaKnown RBP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 NPTXRO95502 500 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 STAG3L1P0CL83 205 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 RAG1P15918 1043 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 ZNF18P17022 549 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 NDUFV2P19404 249 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 IBSPP21815 317 aaPredicted RBP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 PROZP22891 400 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 MAGEA10P43363 369 aaPredicted RBP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 NOLC1Q14978 699 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 KRT31Q15323 416 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 SNRNP35Q16560 246 aaKnown RBP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 KYAT1Q16773 422 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 ZNF568Q3ZCX4 644 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 SEZ6Q53EL9 994 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 CDKAL1Q5VV42 579 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 TCERG1LQ5VWI1 586 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 LRRC55Q6ZSA7 311 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 ZC3H3Q8IXZ2 948 aaKnown RBP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 ZSWIM2Q8NEG5 633 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 SEPT8Q92599 483 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 CCDC127Q96BQ5 260 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 SCLYQ96I15 445 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 CNOT6LQ96LI5 555 aaKnown RBP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 ACAP3Q96P50 834 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 FNBP1Q96RU3 617 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 TUBGCP2Q9BSJ2 902 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 MKNK1Q9BUB5 465 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 OSBPL7Q9BZF2 842 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 HAPLN2Q9GZV7 340 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 HSD3B7Q9H2F3 369 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 PDZD7Q9H5P4 517 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 RPF1Q9H9Y2 349 aaKnown RBP8.28□□□□□ -1.08
LINC00887-201ENST00000397644 ERVK-5Q9HDB9 667 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 AGPAT5Q9NUQ2 364 aa8.28□□□□□ -1.08
LINC00887-201ENST00000397644 IFNKQ9P0W0 207 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms