RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ANKRD35Q8N283 1001 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 PRELID2Q8N945 189 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 COA7Q96BR5 231 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 TGS1Q96RS0 853 aaKnown RBP5.8□□□□□ -1.48
PTPRD-205ENST00000397611 ATP6V0A4Q9HBG4 840 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 TFR2Q9UP52 801 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 C6orf229H3BNL8 230 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 SPAG7O75391 227 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 MED24O75448 989 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 IFNB1P01574 187 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 SERPINB2P05120 415 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 STAT4Q14765 748 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 GRAMD1BQ3KR37 738 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 ZNF568Q3ZCX4 644 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 CMPK2Q5EBM0 449 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 MAP7D3Q8IWC1 876 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 TEX9Q8N6V9 391 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 C7orf43Q8WVR3 580 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 ZKSCAN4Q969J2 545 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-205ENST00000397611 FRMD8P1Q9BZ68 369 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-205ENST00000397611 OSBPL7Q9BZF2 842 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 DLGAP2Q9P1A6 1054 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 ZBTB21Q9ULJ3 1066 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 PCDHA3Q9Y5H8 950 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 COMMD10Q9Y6G5 202 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 ZBED4O75132 1171 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 NPR1P16066 1061 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 CDC25CP30307 473 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 SERPINB4P48594 390 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 APOBEC3HQ6NTF7 200 aaKnown RBP5.8□□□□□ -1.48
PTPRD-205ENST00000397611 KAT2BQ92831 832 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 MSH4O15457 936 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 EXOC3O60645 756 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 ALADP13716 330 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 VCAM1P19320 739 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 DRD4P21917 467 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 SFNP31947 248 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 DRAP1Q14919 205 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-205ENST00000397611 LIN9Q5TKA1 542 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 GLYCTKQ8IVS8 523 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 TTC25Q96NG3 672 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 EHD2Q9NZN4 543 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 TMOD2Q9NZR1 351 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 ZFATQ9P243 1243 aa5.8□□□□□ -1.48
PTPRD-205ENST00000397611 TRAFD1O14545 582 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 DAPK3O43293 454 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ATP6V1G2O95670 118 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 NDUFB10O96000 172 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ARL1P40616 181 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 CACNB1Q02641 598 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 CCDC15Q0P6D6 951 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PICALMQ13492 652 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 GRAMD4Q6IC98 578 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 RHBDF2Q6PJF5 856 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ANKS1BQ7Z6G8 1248 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ADAMTS3O15072 1205 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 RTN2O75298 545 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 GTF2BQ00403 316 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PABPC4Q13310 644 aaKnown RBP eCLIP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 MESDQ14696 234 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PARP6Q2NL67 630 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ZC3H12AQ5D1E8 599 aaKnown RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 KRT39Q6A163 491 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 KCNV1Q6PIU1 500 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 SPATA21Q7Z572 469 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ZNF513Q8N8E2 541 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 RDH13Q8NBN7 331 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 LMO3Q8TAP4 145 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ALG3Q92685 438 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 MIEF2Q96C03 454 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 MS4A14Q96JA4 679 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 OLFM3Q96PB7 478 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 SMG5Q9UPR3 1016 aaKnown RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 TMX2Q9Y320 296 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 STRCP1A6NGW2 1772 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 MYH2Q9UKX2 1941 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 GYG2O15488 501 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 SNX3O60493 162 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 DCTN3O75935 186 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 P4HBP07237 508 aaKnown RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 WEE2P0C1S8 567 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 KLK7P49862 253 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 KRT76Q01546 638 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 CTTNQ14247 550 aaKnown RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 TRIML2Q8N7C3 387 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 DNAJC9Q8WXX5 260 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 IFT122Q9HBG6 1241 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PKD2L1Q9P0L9 805 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PPME1Q9Y570 386 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 KIAA1551Q9HCM1 1747 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PPP1R11O60927 126 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 FAM153BP0C7A2 387 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 GARTP22102 1010 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 SCTRP47872 440 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 FAM153CQ494X1 144 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 MCPH1Q8NEM0 835 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 DTX3LQ8TDB6 740 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 MAML1Q92585 1016 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 APBB2Q92870 758 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 AGPAT1Q99943 283 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms