RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 HES6Q96HZ4 224 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 PWWP2AQ96N64 755 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZSWIM1Q9BR11 485 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 SEMA4AQ9H3S1 761 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 SLX4Q8IY92 1834 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 SYNGAP1Q96PV0 1343 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 CAND2O75155 1236 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 DGAT1O75907 488 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 WEE2P0C1S8 567 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZNF844Q08AG5 666 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 FSTL1Q12841 308 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZKSCAN8Q15776 578 aaPredicted RBP11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 SYCP2LQ5T4T6 812 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 SCYL3Q8IZE3 742 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 ATP8B4Q8TF62 1192 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 CARD9Q9H257 536 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZNF148Q9UQR1 794 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 PASKQ96RG2 1323 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 GNA15P30679 374 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 MDH1P40925 334 aaKnown RBP11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 CCT8L2Q96SF2 557 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 CSADQ9Y600 493 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 COL24A1Q17RW2 1714 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 FOXO6A8MYZ6 492 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 GOLGA8MH3BSY2 632 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 PTPRAP18433 802 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 MNAT1P51948 309 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 GTF2BQ00403 316 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 CYP24A1Q07973 514 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 LONRF1Q17RB8 773 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 MICALCLQ6ZW33 695 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 VSIG10LQ86VR7 867 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 HOOK3Q86VS8 718 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 NLRP14Q86W24 1093 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 RHPN2Q8IUC4 686 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZC3H3Q8IXZ2 948 aaKnown RBP11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 PPP1R13LQ8WUF5 828 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 CALR3Q96L12 384 aaKnown RBP11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 CAMKK2Q96RR4 588 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 GPR88Q9GZN0 384 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 UBE4BO95155 1302 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 MIF4GDA9UHW6 222 aaKnown RBP11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 FMO1Q01740 532 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 KRT17Q04695 432 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 FBXW10Q5XX13 1052 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 B4GALNT4Q76KP1 1039 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 GDAP1Q8TB36 358 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 EPS8L3Q8TE67 593 aaKnown RBP11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 TRAPPC12Q8WVT3 735 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 ELP3Q9H9T3 547 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 INTUQ9ULD6 942 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 AGTPBP1Q9UPW5 1226 aa11.16□□□□□ -0.62
CPSF1P1-201ENST00000397477 DLEC1Q9Y238 1755 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 ADGRA3Q8IWK6 1321 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 TLR3O15455 904 aaKnown RBP11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 DDX3YO15523 660 aaKnown RBP11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 GGPS1O95749 300 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 GJB1P08034 283 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 RARAP10276 462 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 NEFHP12036 1026 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 RPL21P46778 160 aaKnown RBP11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 RNF149Q8NC42 400 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 ANKEF1Q9NU02 776 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZC3H4Q9UPT8 1303 aaKnown RBP11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 A0A0A6YYK5 440 aaPredicted RBP11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 TMEM191BP0C7N4 346 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 KRT10P13645 584 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 ATF2P15336 505 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 CDR2Q01850 454 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 KIF22Q14807 665 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 UAP1Q16222 522 aaPredicted RBP11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 LY6KQ17RY6 165 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 MOB2Q70IA6 237 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 TMC3Q7Z5M5 1100 aa11.15□□□□□ -0.62
CPSF1P1-201ENST00000397477 SCN9AQ15858 1988 aa11.15□□□□□ -0.63
CPSF1P1-201ENST00000397477 TBC1D12O60347 775 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 PHF2O75151 1096 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 GAS8O95995 478 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 HSPA9P38646 679 aaKnown RBP11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 PPP2R2AP63151 447 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 ATP13A4Q4VNC1 1196 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 XKR3Q5GH77 459 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 SLC13A5Q86YT5 568 aaPredicted RBP11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 PRELID2Q8N945 189 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZNF473Q8WTR7 871 aaKnown RBP11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 C9orf72Q96LT7 481 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZWILCHQ9H900 591 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 HOXC10Q9NYD6 342 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 POC1B-GALNT4F8VUJ3 575 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 RASGRF2O14827 1237 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 CHRNB2P17787 502 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 PTENP60484 403 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 IFI35P80217 286 aaPredicted RBP11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 DPY19L2P1Q6NXN4 242 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 ASAP3Q8TDY4 903 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 ZNF526Q8TF50 670 aaPredicted RBP11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 PPM1EQ8WY54 764 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 TMBIM4Q9HC24 238 aa11.14□□□□□ -0.63
CPSF1P1-201ENST00000397477 LRRC4CQ9HCJ2 640 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms