RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SRFP11831 508 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 XRCC6P12956 609 aaKnown RBP eCLIP9.73□□□□□ -0.85
CAPN3-208ENST00000397204 LAMP2P13473 410 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 NDUFV2P19404 249 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 ID4P47928 161 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 CREMQ03060 361 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 PLA2G2CQ5R387 149 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 PHLDB3Q6NSJ2 640 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 TPH2Q8IWU9 490 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 RSAD2Q8WXG1 361 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 SMG7Q92540 1137 aaKnown RBP9.73□□□□□ -0.85
CAPN3-208ENST00000397204 ZNF707Q96C28 371 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-208ENST00000397204 DYDC2Q96IM9 177 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 AIFM3Q96NN9 605 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 MYADMQ96S97 322 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 HSD17B14Q9BPX1 270 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 EIF2AQ9BY44 585 aaKnown RBP9.73□□□□□ -0.85
CAPN3-208ENST00000397204 NFKBIZQ9BYH8 718 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 IRX2Q9BZI1 471 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-208ENST00000397204 NT5C3AQ9H0P0 336 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 PIDD1Q9HB75 910 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 ANKEF1Q9NU02 776 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 PCDHA12Q9UN75 941 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 CLUHO75153 1309 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 CEP250Q9BV73 2442 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 WDR81Q562E7 1941 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 A0A1B0GUA9 196 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 ANHXE9PGG2 379 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 TGM5O43548 720 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 TADA2AO75478 443 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 DGAT1O75907 488 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 LYPLA2O95372 231 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 LMNAP02545 664 aaKnown RBP9.72□□□□□ -0.85
CAPN3-208ENST00000397204 SPATA31D3P0C874 917 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 ARL2P36404 184 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 MLH1P40692 756 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 SCNN1GP51170 649 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 SPIRE1Q08AE8 756 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 STK3Q13188 491 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 CTTNQ14247 550 aaKnown RBP9.72□□□□□ -0.85
CAPN3-208ENST00000397204 MSS51Q4VC12 460 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 NCAPH2Q6IBW4 605 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 SPATA31D4Q6ZUB0 917 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 PIK3AP1Q6ZUJ8 805 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 PALB2Q86YC2 1186 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 BORCS6Q96GS4 357 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 CPB2Q96IY4 423 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 ZFP42Q96MM3 310 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 USB1Q9BQ65 265 aaKnown RBP9.72□□□□□ -0.85
CAPN3-208ENST00000397204 GPR62Q9BZJ7 368 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 TRIM6Q9C030 488 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-208ENST00000397204 XPNPEP1Q9NQW7 623 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 PDRG1Q9NUG6 133 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 PCDHGC3Q9UN70 934 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 SIT1Q9Y3P8 196 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 HES2Q9Y543 173 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 OTOGLQ3ZCN5 2332 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 GPR179Q6PRD1 2367 aa9.72□□□□□ -0.85
CAPN3-208ENST00000397204 PLXNA3P51805 1871 aa9.71□□□□□ -0.85
CAPN3-208ENST00000397204 NCOR2Q9Y618 2525 aa9.71□□□□□ -0.85
CAPN3-208ENST00000397204 ARF4P18085 180 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-208ENST00000397204 RFX1P22670 979 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 SLC19A1P41440 591 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 CYP4A11Q02928 519 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 MBTD1Q05BQ5 628 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 FUT10Q6P4F1 479 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 SLC27A1Q6PCB7 646 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 GSTCDQ8NEC7 633 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 KCNG4Q8TDN1 519 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 GPR152Q8TDT2 470 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 RIN2Q8WYP3 895 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-208ENST00000397204 WASF1Q92558 559 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 SHDQ96IW2 340 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 EIF2AK1Q9BQI3 630 aaKnown RBP9.71□□□□□ -0.86
CAPN3-208ENST00000397204 TBC1D17Q9HA65 648 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 SLC2A4RGQ9NR83 387 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 ADAM28Q9UKQ2 775 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 FCF1Q9Y324 198 aaKnown RBP9.71□□□□□ -0.86
CAPN3-208ENST00000397204 ZMYM2Q9UBW7 1377 aa9.71□□□□□ -0.86
CAPN3-208ENST00000397204 TPRP12270 2363 aaKnown RBP9.7□□□□□ -0.86
CAPN3-208ENST00000397204 F8W810 466 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 PFKFB2O60825 505 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 HNRNPA1P09651 372 aaKnown RBP eCLIP9.7□□□□□ -0.86
CAPN3-208ENST00000397204 MYBP10242 640 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 GLRA2P23416 452 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 FSHRP23945 695 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 AKAP5P24588 427 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 STARD6P59095 220 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 SCRN1Q12765 414 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 GRIK3Q13003 919 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 HTR4Q13639 388 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 CAPSQ13938 189 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 DCLRE1AQ6PJP8 1040 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 LIAT1Q6ZQX7 453 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 C1orf210Q8IVY1 113 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 ASAP3Q8TDY4 903 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 B3GALT6Q96L58 329 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 PRIMPOLQ96LW4 560 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 APOL6Q9BWW8 343 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 NXF3Q9H4D5 531 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms